RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ZNF615Q8N8J6 731 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SLC25A46Q96AG3 418 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 RBMXL1Q96E39 390 aaKnown RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 TXNDC15Q96J42 360 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 PIWIL1Q96J94 861 aaKnown RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 HSH2DQ96JZ2 352 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 TSSK3Q96PN8 268 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 NDUFAF4Q9P032 175 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 A0A087WZY1 265 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CD3GP09693 182 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 IRF2P14316 349 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ARSBP15848 533 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ELK1P19419 428 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 RPL23AP62750 156 aaKnown RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 PNRC1Q12796 327 aaPredicted RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 BAK1Q16611 211 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SIAH1Q8IUQ4 282 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 IL17RDQ8NFM7 739 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 PRRX2Q99811 253 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 MRPL45Q9BRJ2 306 aaKnown RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 CA10Q9NS85 328 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 MPDZO75970 2070 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 C12orf71A8MTZ7 269 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SYT7O43581 403 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 HNF1BP35680 557 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 MLLT10P55197 1068 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 MAZP56270 477 aaKnown RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 IL13RA1P78552 427 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 PAQR3Q6TCH7 311 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 UHRF1Q96T88 793 aaPredicted RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 ZNF471Q9BX82 626 aaPredicted RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 KCNIP1Q9NZI2 227 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SLC43A1O75387 559 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 TGM1P22735 817 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 BMPR1AP36894 532 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SUMO3P55854 103 aaPredicted RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 FLYWCH1Q4VC44 716 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 FAM26DQ5JW98 314 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 LINC00596Q86U02 117 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CENPSQ8N2Z9 138 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 TCTEX1D1Q8N7M0 179 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 RPUSD4Q96CM3 377 aaKnown RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 TMEM204Q9BSN7 226 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SEMA6AQ9H2E6 1030 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CHRDQ9H2X0 955 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 TCEAL2Q9H3H9 227 aaPredicted RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 B3GNT2Q9NY97 397 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 TRBV2A0A0J9YWF9 115 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 A8MVM7 634 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CPNE6O95741 557 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CER1O95813 267 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 C8AP07357 584 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 FGF9P31371 208 aaPredicted RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 C17orf67Q0P5P2 114 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 UGCGQ16739 394 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ISXQ2M1V0 245 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 PSAPL1Q6NUJ1 521 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 HAGHLQ6PII5 290 aaPredicted RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 PAPD4Q6PIY7 484 aaKnown RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 PIGKQ92643 395 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 MECRQ9BV79 373 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 KLK14Q9P0G3 267 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 EGFL7Q9UHF1 273 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 GPR45Q9Y5Y3 372 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ANKRD63C9JTQ0 380 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 FFAR3O14843 346 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 GPR42O15529 346 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 FGF3P11487 239 aaPredicted RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 MPSTP25325 297 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 TAS2R38P59533 333 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 GRIN2CQ14957 1233 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ITPRIPL2Q3MIP1 535 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SLC2A7Q6PXP3 512 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 LRTOMTQ8WZ04 291 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CTPS2Q9NRF8 586 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 NCDNQ9UBB6 729 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 RCCD1A6NED2 376 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 NEDD8-MDP1E9PL57 170 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CFHP08603 1231 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 NBPF12Q5TAG4 269 aaPredicted RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 LYRM7Q5U5X0 104 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 C11orf96Q7Z7L8 435 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ISCA2Q86U28 154 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SMAD5Q99717 465 aaKnown RBP3.79□□□□□ -1.8
USH2A-201ENST00000307340 MCCC2Q9HCC0 563 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 STARD5Q9NSY2 213 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 GPSM3Q9Y4H4 160 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 RNF215Q9Y6U7 377 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 THSD7AQ9UPZ6 1657 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 C20orf202A1L168 122 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CACNG3O60359 315 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 HLA-DQB2P05538 268 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 ARF5P84085 180 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 PPM1JQ5JR12 505 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 SAMD7Q7Z3H4 446 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 KREMEN2Q8NCW0 462 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 FCRL1Q96LA6 429 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 CACNG6Q9BXT2 260 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 GGT7Q9UJ14 662 aa3.79□□□□□ -1.8
USH2A-201ENST00000307340 PQBP1O60828 265 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms