RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 HMBOX1Q6NT76 420 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 ARRDC3Q96B67 414 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 THSD1Q9NS62 852 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 KCNN3Q9UGI6 736 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 ZNF443Q9Y2A4 671 aaPredicted RBP14.98□□□□□ -0.01
USP42-201ENST00000306177 WDR37Q9Y2I8 494 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 GGT3PA6NGU5 568 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 ANKRD28O15084 1053 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 PTTG1O95997 202 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 MMP2P08253 660 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 CPOXP36551 454 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 TUBB3Q13509 450 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 FAM205BPQ63HN1 556 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 AWAT2Q6E213 333 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 SPARTQ8N0X7 666 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 ADAMTS19Q8TE59 1207 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 LRRC46Q96FV0 321 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 LAMB1P07942 1786 aa14.98□□□□□ -0.01
USP42-201ENST00000306177 CENPBD1B2RD01 187 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 H3BUI4 141 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 FBP2O00757 339 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 EN2P19622 333 aaPredicted RBP14.97□□□□□ -0.01
USP42-201ENST00000306177 PTGER1P34995 402 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 CXCR4P61073 352 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 UBE2NP61088 152 aaKnown RBP14.97□□□□□ -0.01
USP42-201ENST00000306177 RSU1Q15404 277 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 HES5Q5TA89 166 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 FAM83HQ6ZRV2 1179 aaPredicted RBP14.97□□□□□ -0.01
USP42-201ENST00000306177 HORMAD2Q8N7B1 307 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 SDR9C7Q8NEX9 313 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 MFSD8Q8NHS3 518 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 ITFG2Q969R8 447 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 MAELQ96JY0 434 aaKnown RBP14.97□□□□□ -0.01
USP42-201ENST00000306177 PRSS16Q9NQE7 514 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 SLAMF8Q9P0V8 285 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 CBLCQ9ULV8 474 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 M0R129 80 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 CD40LGP29965 261 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 SFTPDP35247 375 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 TANGO2Q6ICL3 276 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 ZNF709Q8N972 641 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 GALNT6Q8NCL4 622 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 NDNFQ8TB73 568 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 GATA6Q92908 595 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 NECAB3Q96P71 396 aaPredicted RBP14.97□□□□□ -0.01
USP42-201ENST00000306177 CNOT2Q9NZN8 540 aaKnown RBP14.97□□□□□ -0.01
USP42-201ENST00000306177 MRPL15Q9P015 296 aaKnown RBP14.97□□□□□ -0.01
USP42-201ENST00000306177 PCDHGA8Q9Y5G5 932 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 CDK1P06493 297 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 PODNL1Q6PEZ8 512 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 ZNF704Q6ZNC4 412 aaPredicted RBP14.97□□□□□ -0.01
USP42-201ENST00000306177 OR8J2Q8NGG1 315 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 FAM174AQ8TBP5 190 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 OR5B2Q96R09 309 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 VDAC3Q9Y277 283 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 USP54Q70EL1 1684 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 HOXC5Q00444 222 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 GLO1Q04760 184 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 SRYQ05066 204 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 AIMP2Q13155 320 aaKnown RBP14.97□□□□□ -0.01
USP42-201ENST00000306177 SELPLGQ14242 412 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 ARL6IP1Q15041 203 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 ENTPD8Q5MY95 495 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 ASCC1Q8N9N2 400 aaKnown RBP14.97□□□□□ -0.01
USP42-201ENST00000306177 ADAMTS16Q8TE57 1224 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 RHBDD1Q8TEB9 315 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 SPTSSAQ969W0 71 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 CPPED1Q9BRF8 314 aaPredicted RBP14.97□□□□□ -0.01
USP42-201ENST00000306177 RBM24Q9BX46 236 aaKnown RBP14.97□□□□□ -0.01
USP42-201ENST00000306177 ICKQ9UPZ9 632 aa14.97□□□□□ -0.01
USP42-201ENST00000306177 AGAP5A6NIR3 686 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 PCP4L1A6NKN8 68 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 ARAFP10398 606 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 MAOBP27338 520 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 SYPL1Q16563 259 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 SPRYD4Q8WW59 207 aaPredicted RBP14.96□□□□□ -0.01
USP42-201ENST00000306177 NANOS1Q8WY41 292 aaKnown RBP14.96□□□□□ -0.01
USP42-201ENST00000306177 ZC3H10Q96K80 434 aaKnown RBP14.96□□□□□ -0.01
USP42-201ENST00000306177 CD93Q9NPY3 652 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 HIF3AQ9Y2N7 669 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 ANKRD12Q6UB98 2062 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 F5H0A9 414 aaPredicted RBP14.96□□□□□ -0.01
USP42-201ENST00000306177 HOXB9P17482 250 aaPredicted RBP14.96□□□□□ -0.01
USP42-201ENST00000306177 HTR3AP46098 478 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 FGL1Q08830 312 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 VRK2Q86Y07 508 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 SPPL3Q8TCT6 385 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 GPR148Q8TDV2 347 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 RLN3Q8WXF3 142 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 SFXN2Q96NB2 322 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 OR52D1Q9H346 318 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 TMEM185BQ9H7F4 350 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 NLKQ9UBE8 527 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 UBQLN2Q9UHD9 624 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 SLC6A5Q9Y345 797 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 LTBP4Q8N2S1 1624 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 CACNG3O60359 315 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 AIFM1O95831 613 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 ZNF28P17035 718 aa14.96□□□□□ -0.01
USP42-201ENST00000306177 SOX3P41225 446 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms