RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CNTNAP4Q9C0A0 1308 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 K7EQM0 130 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 PPP1R3DO95685 299 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 TRHRP34981 398 aaPredicted RBP12.69□□□□□ -0.38
TRIM56-201ENST00000306085 ETV1P50549 477 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 EMP3P54852 163 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 HBG1P69891 147 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 HBG2P69892 147 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 TREML2Q5T2D2 321 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 ADAMTS19Q8TE59 1207 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 WFIKKN2Q8TEU8 576 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 DIO2Q92813 273 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 SLC39A9Q9NUM3 307 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 OLAHQ9NV23 265 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 EXO1Q9UQ84 846 aaKnown RBP12.69□□□□□ -0.38
TRIM56-201ENST00000306085 ROBO3Q96MS0 1386 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 PGCP20142 388 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 PGAP1Q75T13 922 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 TRUB1Q8WWH5 349 aaKnown RBP12.69□□□□□ -0.38
TRIM56-201ENST00000306085 OR10A5Q9H207 317 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 OR10A2Q9H208 303 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 MINDY3Q9H8M7 445 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 UFSP2Q9NUQ7 469 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 TULP4Q9NRJ4 1543 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 SULT1C4O75897 302 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 GBX1Q14549 363 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 DUSP7Q16829 419 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 CATSPERGQ6ZRH7 1159 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 OR4A16Q8NH70 328 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 AIG1Q9NVV5 245 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 PCDHAC2Q9Y5I4 1007 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 TBX18O95935 607 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 ELNP15502 786 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 HLA-FP30511 346 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 MAMDC2Q7Z304 686 aaPredicted RBP12.69□□□□□ -0.38
TRIM56-201ENST00000306085 CASD1Q96PB1 797 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 INTS14Q96SY0 518 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 TGM5O43548 720 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 FAM163BP0C2L3 166 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 CXCL9Q07325 125 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 RPL7L1Q6DKI1 246 aaKnown RBP12.69□□□□□ -0.38
TRIM56-201ENST00000306085 OR6T1Q8NGN1 323 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 PPP1R35Q8TAP8 253 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.69□□□□□ -0.38
TRIM56-201ENST00000306085 C2CD4BA6NLJ0 364 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 XCR1P46094 333 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 RAB11AP62491 216 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 HSF1Q00613 529 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 VASNQ6EMK4 673 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 ZUFSPQ96AP4 578 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 NWD1Q149M9 1564 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 SOBPA7XYQ1 873 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 AOC2O75106 756 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 LILRA4P59901 499 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 TMEM31Q5JXX7 168 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 RAB39BQ96DA2 213 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 DICER1Q9UPY3 1922 aaKnown RBP12.69□□□□□ -0.38
TRIM56-201ENST00000306085 ALKQ9UM73 1620 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 H3BML4 177 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 SPATA31C1P0DKV0 1188 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 CA5AP35218 305 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 GIMAP1Q8WWP7 306 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 SLAMF7Q9NQ25 335 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 GIMAP2Q9UG22 337 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 NENFQ9UMX5 172 aa12.69□□□□□ -0.38
TRIM56-201ENST00000306085 SOHLH1Q5JUK2 328 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 C10orf62Q5T681 223 aaPredicted RBP12.68□□□□□ -0.38
TRIM56-201ENST00000306085 SIGLECL1Q8N7X8 197 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 KIAA1958Q8N8K9 716 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 NIPAL2Q9H841 368 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 DUSP22Q9NRW4 184 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 SLC2A6Q9UGQ3 507 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 LRRC10BA6NIK2 292 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 CILP2Q8IUL8 1156 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 TMEM217Q8N7C4 229 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 SRRQ9GZT4 340 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 STXBP5LQ9Y2K9 1186 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 ECM1Q16610 540 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 ACOT13Q9NPJ3 140 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 CACNA1IQ9P0X4 2223 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 CLDN1O95832 211 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 GK3PQ14409 553 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 KREMEN2Q8NCW0 462 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 DAZLQ92904 295 aaKnown RBP12.68□□□□□ -0.38
TRIM56-201ENST00000306085 LHPPQ9H008 270 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 B4DXG7 233 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 F6UZH7 168 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 HPRP00739 348 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 HNRNPA2B1P22626 353 aaKnown RBP12.68□□□□□ -0.38
TRIM56-201ENST00000306085 HOXA11P31270 313 aaPredicted RBP12.68□□□□□ -0.38
TRIM56-201ENST00000306085 PTGIRP43119 386 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 EFNA3P52797 238 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 MBTPS1Q14703 1052 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 CREB3L4Q8TEY5 395 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 FBXL18Q96ME1 805 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 IKZF4Q9H2S9 585 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 BABAM2Q9NXR7 383 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 CDK5RAP2Q96SN8 1893 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 YJEFN3A6XGL0 299 aa12.68□□□□□ -0.38
TRIM56-201ENST00000306085 MEP1BQ16820 701 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms