RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 AGAP6Q5VW22 663 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 NXNL2Q5VZ03 156 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 ZCCHC12Q6PEW1 402 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 CD200R1LQ6Q8B3 271 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 FIGLAQ6QHK4 219 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 TMEM92Q6UXU6 159 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 ZNF836Q6ZNA1 936 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 ZNF620Q6ZNG0 422 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 LAX1Q8IWV1 398 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 RNF113BQ8IZP6 322 aaKnown RBP13.2□□□□□ -0.3
RAB40A-201ENST00000304236 KLHL36Q8N4N3 616 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 GDPD1Q8N9F7 314 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 OR2T33Q8NG76 320 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 OR4Q3Q8NH05 313 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 TM9SF4Q92544 642 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 PMM1Q92871 262 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 SIPA1Q96FS4 1042 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 AGAP4Q96P64 663 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 JAM3Q9BX67 310 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 MIR1-1HGQ9H1L0 117 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 SLC6A17Q9H1V8 727 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 TPK1Q9H3S4 243 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 SMOC1Q9H4F8 434 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 EVA1AQ9H8M9 152 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 MOV10Q9HCE1 1003 aaKnown RBP13.2□□□□□ -0.3
RAB40A-201ENST00000304236 RXFP3Q9NSD7 469 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 TBC1D24Q9ULP9 559 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 C19orf53Q9UNZ5 99 aaPredicted RBP13.2□□□□□ -0.3
RAB40A-201ENST00000304236 SLC22A7Q9Y694 548 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 SPAG17Q6Q759 2223 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 A0A1W2PQF6 199 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 AKAP8O43823 692 aaKnown RBP13.2□□□□□ -0.3
RAB40A-201ENST00000304236 DBIP07108 87 aaKnown RBP13.2□□□□□ -0.3
RAB40A-201ENST00000304236 MSL3P1P0C860 447 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 UGT2B7P16662 529 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 RPS25P62851 125 aaKnown RBP13.2□□□□□ -0.3
RAB40A-201ENST00000304236 EEF1A1P68104 462 aaKnown RBP13.2□□□□□ -0.3
RAB40A-201ENST00000304236 MXD1Q05195 221 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 RUNX2Q13950 521 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 PMS2CLQ68D20 193 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 ZNF544Q6NX49 715 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 MEX3DQ86XN8 651 aaKnown RBP13.2□□□□□ -0.3
RAB40A-201ENST00000304236 ZNF619Q8N2I2 560 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 SCAIQ8N9R8 606 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 ZNF485Q8NCK3 441 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 OR52N1Q8NH53 320 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 RSC1A1Q92681 617 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 SDF2Q99470 211 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 C6orf106Q9H6K1 298 aaPredicted RBP13.2□□□□□ -0.3
RAB40A-201ENST00000304236 SYNDIG1Q9H7V2 258 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 PLEKHB1Q9UF11 243 aaPredicted RBP13.2□□□□□ -0.3
RAB40A-201ENST00000304236 SATB2Q9UPW6 733 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 CLCA2Q9UQC9 943 aa13.2□□□□□ -0.3
RAB40A-201ENST00000304236 SCN3AQ9NY46 2000 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 A0A087WV62 115 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 TRAPPC13A5PLN9 417 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 AK1P00568 194 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 IGHA1P01876 353 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 THY1P04216 161 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 SDC2P34741 201 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 CLDN2P57739 230 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 DUSP5Q16690 384 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 GLYR1Q49A26 553 aaPredicted RBP13.19□□□□□ -0.3
RAB40A-201ENST00000304236 ZNF628Q5EBL2 1059 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 MANEAQ5SRI9 462 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 SLC30A6Q6NXT4 461 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 RD3Q7Z3Z2 195 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 GID4Q8IVV7 300 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 ZNF655Q8N720 491 aaPredicted RBP13.19□□□□□ -0.3
RAB40A-201ENST00000304236 ZCCHC10Q8TBK6 192 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 BRIX1Q8TDN6 353 aaKnown RBP13.19□□□□□ -0.3
RAB40A-201ENST00000304236 TMEM203Q969S6 136 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 SPACA7Q96KW9 195 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 FCRL4Q96PJ5 515 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 ZNF350Q9GZX5 532 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 ABCB9Q9NP78 766 aa13.19□□□□□ -0.3
RAB40A-201ENST00000304236 A6NCN8 305 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 FABP12A6NFH5 140 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 TM4SF5O14894 197 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 FMO6PO60774 539 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 STX11O75558 287 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 HLA-DPB1P04440 258 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 IL7P13232 177 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 RPS4Y1P22090 263 aaKnown RBP13.18□□□□□ -0.3
RAB40A-201ENST00000304236 HNRNPA2B1P22626 353 aaKnown RBP13.18□□□□□ -0.3
RAB40A-201ENST00000304236 GPR4P46093 362 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 OR2B6P58173 313 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 SIM1P81133 766 aaPredicted RBP13.18□□□□□ -0.3
RAB40A-201ENST00000304236 HOXC5Q00444 222 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 KCNJ8Q15842 424 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 ZNF79Q15937 498 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 DEFB134Q4QY38 66 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 EXOSC6Q5RKV6 272 aaKnown RBP13.18□□□□□ -0.3
RAB40A-201ENST00000304236 FCRL6Q6DN72 434 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 TCEAL6Q6IPX3 200 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 RPL13AP3Q6NVV1 102 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 FAM131AQ6UXB0 335 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 TMEM255BQ8WV15 326 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 TCEAL3Q969E4 200 aa13.18□□□□□ -0.3
RAB40A-201ENST00000304236 DIRAS2Q96HU8 199 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms