RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ZSWIM7Q19AV6 140 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 PWWP2BQ6NUJ5 590 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 ZNF550Q7Z398 422 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 LAPTM4BQ86VI4 370 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 HOXB13Q92826 284 aaPredicted RBP13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 ZNF226Q9NYT6 803 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 TCRBV16S1A1N1A0A5B0 115 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 KPNA4O00629 521 aaPredicted RBP13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 REM1O75628 298 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 MT-ND2P03891 347 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 SLC37A1P57057 533 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 DCDP81605 110 aaKnown RBP13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 TSPAN31Q12999 210 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 IQCF1Q8N6M8 205 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 ZNF321PQ8N8H1 164 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 APH1BQ8WW43 257 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 PLEKHA8Q96JA3 519 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 RBM38Q9H0Z9 239 aaKnown RBP13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 DUSP21Q9H596 190 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 ENAMQ9NRM1 1142 aa13.41□□□□□ -0.26
SHCBP1-201ENST00000303383 EFCAB7A8K855 629 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 PSMB9P28065 219 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 IL12BP29460 328 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 GRK6P43250 576 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 PPICP45877 212 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 CCR4P51679 360 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 MBOAT2Q6ZWT7 520 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 MED25Q71SY5 747 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 CCDC103Q8IW40 242 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 TCEANCQ8N8B7 351 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 RHBDD1Q8TEB9 315 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 LCORQ96JN0 433 aaPredicted RBP13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 TBC1D23Q9NUY8 699 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 PCDHGA10Q9Y5H3 936 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 BDP1A6H8Y1 2624 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 WDR87Q6ZQQ6 2873 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 IGKV3D-11A0A0A0MRZ8 115 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 GTPBP1O00178 669 aaKnown RBP13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 SCDO00767 359 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 FMO6PO60774 539 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 LDOC1O95751 146 aaPredicted RBP13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 SNAPC1Q16533 368 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 SLX4IPQ5VYV7 408 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 LAIR1Q6GTX8 287 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 TCEAL6Q6IPX3 200 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 TMCO5AQ8N6Q1 288 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 TCEAL3Q969E4 200 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 ARSGQ96EG1 525 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 SLC38A2Q96QD8 506 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 CTRCQ99895 268 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 RHNO1Q9BSD3 238 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 TRIM2Q9C040 744 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 NXF5Q9H1B4 397 aaKnown RBP13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 RABL2BQ9UNT1 228 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 CLCA1A8K7I4 914 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 ZNF99A8MXY4 864 aaPredicted RBP13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 MAN1A2O60476 641 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 HTR1AP08908 422 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 ZGLP1P0C6A0 271 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 EMX1Q04741 257 aaPredicted RBP13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 CLEC12AQ5QGZ9 265 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 SLC27A4Q6P1M0 643 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 CD300LDQ6UXZ3 194 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 PRSS48Q7RTY5 328 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 ZBTB44Q8NCP5 570 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 OR8J1Q8NGP2 316 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 TMEM239Q8WW34 195 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 HOXD1Q9GZZ0 328 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 LHPPQ9H008 270 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 EGLN3Q9H6Z9 239 aa13.4□□□□□ -0.26
SHCBP1-201ENST00000303383 D6RAR5 112 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 JUNBP17275 347 aaPredicted RBP13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 DRD5P21918 477 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 MAP2K4P45985 399 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 GCGRP47871 477 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 GIPRP48546 466 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 DCAF7P61962 342 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 TUBA3CQ13748 450 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 ZNF528Q3MIS6 628 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 PRR22Q8IZ63 422 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 GATSQ8NAP1 163 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 AGBL5Q8NDL9 886 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 ISOC1Q96CN7 298 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 PTTG2Q9NZH5 202 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 MED31Q9Y3C7 131 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 SH3D21A4FU49 640 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 SERINC4A6NH21 518 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 PIP5K1CO60331 668 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 NTN1O95631 604 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 IFI30P13284 250 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 HTR2AP28223 471 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 STAT5AP42229 794 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 NR0B1P51843 470 aaKnown RBP13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 ZNF141Q15928 474 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 LANCL3Q6ZV70 420 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 PHOSPHO1Q8TCT1 267 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 TRUB1Q8WWH5 349 aaKnown RBP13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 MPP4Q96JB8 637 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 NUDT9Q9BW91 350 aa13.39□□□□□ -0.27
SHCBP1-201ENST00000303383 UBQLN4Q9NRR5 601 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms