RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 SERPINA5P05154 406 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 HMGCLP35914 325 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 RAD52P43351 418 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 SSR4P51571 173 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 FAM76BQ5HYJ3 339 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 GRHL2Q6ISB3 625 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 DPPA4Q7L190 304 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 SMIM3Q9BZL3 60 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 RANBP3Q9H6Z4 567 aaPredicted RBP7.32□□□□□ -1.24
SCN9A-201ENST00000303354 ACKR4Q9NPB9 350 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 CLEC3BP05452 202 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 MCCD1P59942 119 aaPredicted RBP7.32□□□□□ -1.24
SCN9A-201ENST00000303354 SPOCK1Q08629 439 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 CTSL3PQ5NE16 218 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 KLHDC10Q6PID8 442 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 RSPO2Q6UXX9 243 aaPredicted RBP7.32□□□□□ -1.24
SCN9A-201ENST00000303354 CD200R1Q8TD46 325 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 TP63Q9H3D4 680 aaPredicted RBP7.32□□□□□ -1.24
SCN9A-201ENST00000303354 SERTAD4Q9NUC0 356 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 COQ3Q9NZJ6 369 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 ABRACLQ9P1F3 81 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 LRRN3E7EW58 273 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 H7C417 338 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 STK17BO94768 372 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 DDAH2O95865 285 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 HSD3B1P14060 373 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 PCSK2P16519 638 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 PKDCCQ504Y2 493 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 GPR139Q6DWJ6 353 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 ABHD12BQ7Z5M8 362 aaPredicted RBP7.32□□□□□ -1.24
SCN9A-201ENST00000303354 FZR1Q9UM11 496 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 IL9P15248 144 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 FPR1P21462 350 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 DRD5P21918 477 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 FDXRP22570 491 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 SYPL1Q16563 259 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 PAGE3Q5JUK9 113 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 ZNF382Q96SR6 550 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 UFSP2Q9NUQ7 469 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 FKBP14Q9NWM8 211 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 A0A096LPI6 279 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 A0A1W2PQ09 198 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 RBBP9O75884 186 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 FAM163BP0C2L3 166 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 DRD2P14416 443 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 SPINK2P20155 84 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 CNR2P34972 360 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 CARD18P57730 90 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 FAM199XQ6PEV8 388 aaPredicted RBP7.32□□□□□ -1.24
SCN9A-201ENST00000303354 DNAJB8Q8NHS0 232 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 SLC2A12Q8TD20 617 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 FER1L6-AS2Q96M78 137 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 HCAR1Q9BXC0 346 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 MAF1Q9H063 256 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 FGF21Q9NSA1 209 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 IGSF5Q9NSI5 407 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 TRAV18A0A075B6X5 111 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 KDELR2P33947 212 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 PTH2RP49190 550 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 EPHA5P54756 1037 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 ENTPD8Q5MY95 495 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 PGM2L1Q6PCE3 622 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 GPR155Q7Z3F1 870 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 FAXDC2Q96IV6 333 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 SLC30A3Q99726 388 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 PHF7Q9BWX1 381 aaPredicted RBP7.32□□□□□ -1.24
SCN9A-201ENST00000303354 NMNAT1Q9HAN9 279 aaPredicted RBP7.32□□□□□ -1.24
SCN9A-201ENST00000303354 PLA2G3Q9NZ20 509 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 RNF6Q9Y252 685 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 FAM90A27PA6NNH2 459 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 BET1O15155 118 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 IFNA17P01571 189 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 CAPNS1P04632 268 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 HOXB9P17482 250 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 AHRP35869 848 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 Q6ZPB1 254 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 ISCA2Q86U28 154 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 ACTR3BQ9P1U1 418 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 KLHL21Q9UJP4 597 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 BOKQ9UMX3 212 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 GABRR3A8MPY1 467 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 DIRAS3O95661 229 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 RGNQ15493 299 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 PAPD4Q6PIY7 484 aaKnown RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 XKR5Q6UX68 686 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 ZNF704Q6ZNC4 412 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 ZNF431Q8TF32 576 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 TSPEARQ8WU66 669 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 ZNF681Q96N22 645 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 SCGB3A2Q96PL1 93 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 CNN2Q99439 309 aaKnown RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 TUBB1Q9H4B7 451 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 PRMT8Q9NR22 394 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 RIMS3Q9UJD0 308 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 KCNIP3Q9Y2W7 256 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 EXOSC1Q9Y3B2 195 aaKnown RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 H7C2Y5 167 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 PIPP12273 146 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-201ENST00000303354 AQP2P41181 271 aa7.31□□□□□ -1.24
SCN9A-201ENST00000303354 ZNF136P52737 540 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms