RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CIB4A0PJX0 185 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 ADAM10O14672 748 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 GGT5P36269 586 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 GATMP50440 423 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 SLC10A2Q12908 348 aaPredicted RBP7.21□□□□□ -1.25
SF3B3-201ENST00000302516 SSX2Q16385 188 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 MPEG1Q2M385 716 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 UBE2UQ5VVX9 321 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 GDF6Q6KF10 455 aaPredicted RBP7.21□□□□□ -1.25
SF3B3-201ENST00000302516 TMPPEQ6ZT21 453 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 RDH10Q8IZV5 341 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 OR1S1Q8NH92 325 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 MYLIPQ8WY64 445 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 GKN1Q9NS71 199 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 NDRG2Q9UN36 371 aaKnown RBP7.21□□□□□ -1.25
SF3B3-201ENST00000302516 OTOFQ9HC10 1997 aa7.21□□□□□ -1.25
SF3B3-201ENST00000302516 LOC102725191A0A1B0GVB3 256 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 ALPLP05186 524 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 SNRPD2P62316 118 aaKnown RBP7.21□□□□□ -1.26
SF3B3-201ENST00000302516 MS4A2Q01362 244 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 LMAN2Q12907 356 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 C2orf27AQ580R0 203 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 CMIPQ8IY22 773 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 OR5D16Q8NGK9 328 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 KLHDC7BQ96G42 594 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 WDR6Q9NNW5 1121 aaKnown RBP7.21□□□□□ -1.26
SF3B3-201ENST00000302516 TESQ9UGI8 421 aaKnown RBP7.21□□□□□ -1.26
SF3B3-201ENST00000302516 GPR45Q9Y5Y3 372 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 TAF1P21675 1872 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 TRAV18A0A075B6X5 111 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 A0A1W2PQ09 198 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 GGT3PA6NGU5 568 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 INHAP05111 366 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 SCG5P05408 212 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 GDI1P31150 447 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 CPOXP36551 454 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 RAB4BP61018 213 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 DEFA6Q01524 100 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 TEAD2Q15562 447 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 KIAA0895LQ68EN5 471 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 LPCAT3Q6P1A2 487 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF100Q8IYN0 542 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 RCBTB1Q8NDN9 531 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 OR6C4Q8NGE1 309 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 OR2T11Q8NH01 316 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 CD200R1Q8TD46 325 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 HAS2Q92819 552 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 INPP5KQ9BT40 448 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 NFKBIEO00221 500 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 T-ENOLP0DO92 83 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 CPT2P23786 658 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 CAV2P51636 162 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 OTOP2Q7RTS6 562 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 IQCF1Q8N6M8 205 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 DNAAF1Q8NEP3 725 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 TXNDC15Q96J42 360 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 NOX3Q9HBY0 568 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 SLC7A7Q9UM01 511 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 KCNK6Q9Y257 313 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 KLK4Q9Y5K2 254 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 B3GALT1Q9Y5Z6 326 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 FAM72CH0Y354 149 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 LILRB5O75023 590 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 HBE1P02100 147 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 FAM72AQ5TYM5 149 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 SFRP4Q6FHJ7 346 aaPredicted RBP7.21□□□□□ -1.26
SF3B3-201ENST00000302516 FAM72DQ6L9T8 149 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 C1orf94Q6P1W5 598 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 CFAP77Q6ZQR2 320 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 FAM72BQ86X60 149 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 RNF113BQ8IZP6 322 aaKnown RBP7.21□□□□□ -1.26
SF3B3-201ENST00000302516 GAB3Q8WWW8 586 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 PHYHIPQ92561 330 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 PSD2Q9BQI7 771 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 DPH7Q9BTV6 452 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 RNF39Q9H2S5 420 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 TCEAL2Q9H3H9 227 aaPredicted RBP7.21□□□□□ -1.26
SF3B3-201ENST00000302516 TREX1Q9NSU2 369 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 ADAM29Q9UKF5 820 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 INPPL1O15357 1258 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 C6P13671 934 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 GIFP27352 417 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 CX3CR1P49238 355 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 MEF2AQ02078 507 aaPredicted RBP7.21□□□□□ -1.26
SF3B3-201ENST00000302516 DLX2Q07687 328 aaPredicted RBP7.21□□□□□ -1.26
SF3B3-201ENST00000302516 GPM6BQ13491 265 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 SF3B4Q15427 424 aaKnown RBP eCLIP7.21□□□□□ -1.262e-7■■■■□ 23.1
SF3B3-201ENST00000302516 MSMO1Q15800 293 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 LETMD1Q6P1Q0 360 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 C5orf46Q6UWT4 87 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 RETREG3Q86VR2 466 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 OR6V1Q8N148 313 aa7.21□□□□□ -1.26
SF3B3-201ENST00000302516 TRMT2BQ96GJ1 504 aaKnown RBP7.21□□□□□ -1.26
SF3B3-201ENST00000302516 SIPA1L3O60292 1781 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-201ENST00000302516 TRIM64BA6NI03 449 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 CYB5BO43169 146 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF140P52738 457 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-201ENST00000302516 FAM122CQ6P4D5 195 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 RTL10Q7L3V2 364 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 CPOQ8IVL8 374 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms