RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 SOX18P35713 384 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 CASP3P42574 277 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 NKX2-5P52952 324 aaPredicted RBP12.66□□□□□ -0.38
CDH8-201ENST00000299345 YPEL5P62699 121 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 IL18Q14116 193 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 DEFB110Q30KQ9 67 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 AADACL4Q5VUY2 407 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 AGAP6Q5VW22 663 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 ZC3H14Q6PJT7 736 aaKnown RBP12.66□□□□□ -0.38
CDH8-201ENST00000299345 XKRXQ6PP77 449 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 AGAP4Q96P64 663 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 LYRM4Q9HD34 91 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 ISYNA1Q9NPH2 558 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 INIPQ9NRY2 104 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 MRPS18AQ9NVS2 196 aaKnown RBP12.66□□□□□ -0.38
CDH8-201ENST00000299345 TRAPPC4Q9Y296 219 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 TMEM5Q9Y2B1 443 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 A0A0J9YY10 115 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 AK1P00568 194 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 NID1P14543 1247 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 MAPK14Q16539 360 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 CADM2Q8N3J6 435 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 KATNB1Q9BVA0 655 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 KCNN2Q9H2S1 579 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 MED20Q9H944 212 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 ATP13A2Q9NQ11 1180 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 DUSP22Q9NRW4 184 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 CHST2Q9Y4C5 530 aa12.66□□□□□ -0.38
CDH8-201ENST00000299345 MN1Q10571 1320 aaPredicted RBP12.65□□□□□ -0.38
CDH8-201ENST00000299345 CDC42EP2O14613 210 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 SSX4O60224 188 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 SSTR4P31391 388 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 MRPS21P82921 87 aaKnown RBP12.65□□□□□ -0.38
CDH8-201ENST00000299345 BAK1Q16611 211 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 PRPF38BQ5VTL8 546 aaKnown RBP12.65□□□□□ -0.38
CDH8-201ENST00000299345 QSOX2Q6ZRP7 698 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 GDPD1Q8N9F7 314 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 OR13H1Q8NG92 308 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 UBASH3BQ8TF42 649 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 BPIFA2Q96DR5 249 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 ARSGQ96EG1 525 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 POT1Q9NUX5 634 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 PCDHGB2Q9Y5G2 931 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 CENPVL1A0A0U1RR11 272 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 C2orf92A0A1B0GVN3 265 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 RDH16O75452 317 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 REM1O75628 298 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 CD79BP40259 229 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 PPP3R1P63098 170 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 LCN1P1Q5VSP4 162 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 SMAD5Q99717 465 aaKnown RBP12.65□□□□□ -0.38
CDH8-201ENST00000299345 COQ7Q99807 217 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 ZNF350Q9GZX5 532 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 POU2F3Q9UKI9 436 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 ITGB1BP2Q9UKP3 347 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 GRIP1Q9Y3R0 1128 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 C5orf42Q9H799 3197 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.65□□□□□ -0.38
CDH8-201ENST00000299345 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.65□□□□□ -0.38
CDH8-201ENST00000299345 TRDV1A0A1B0GX56 115 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 A8MU76 341 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 GNB5O14775 395 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 COQ9O75208 318 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 CSF2P04141 144 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 FUT1P19526 365 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 SKP1P63208 163 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 RAB30Q15771 203 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 AMZ1Q400G9 498 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 ZNF628Q5EBL2 1059 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 ARL9Q6T311 187 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 RNF113BQ8IZP6 322 aaKnown RBP12.65□□□□□ -0.38
CDH8-201ENST00000299345 SCAIQ8N9R8 606 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 PFN4Q8NHR9 129 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 BAHD1Q8TBE0 780 aaPredicted RBP12.65□□□□□ -0.38
CDH8-201ENST00000299345 TM4SF19Q96DZ7 209 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 WDFY2Q96P53 400 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 SRRQ9GZT4 340 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 FBXO34Q9NWN3 711 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 MRPS33Q9Y291 106 aaKnown RBP12.65□□□□□ -0.38
CDH8-201ENST00000299345 OR10H1Q9Y4A9 318 aa12.65□□□□□ -0.38
CDH8-201ENST00000299345 OR5K4A6NMS3 321 aa12.64□□□□□ -0.39
CDH8-201ENST00000299345 TNFSF14O43557 240 aa12.64□□□□□ -0.39
CDH8-201ENST00000299345 MRPL3P09001 348 aaKnown RBP12.64□□□□□ -0.39
CDH8-201ENST00000299345 SLC2A2P11168 524 aaPredicted RBP12.64□□□□□ -0.39
CDH8-201ENST00000299345 TALDO1P37837 337 aa12.64□□□□□ -0.39
CDH8-201ENST00000299345 RABIFP47224 123 aa12.64□□□□□ -0.39
CDH8-201ENST00000299345 SNRPNP63162 240 aaKnown RBP12.64□□□□□ -0.39
CDH8-201ENST00000299345 VWA5B2Q8N398 1253 aa12.64□□□□□ -0.39
CDH8-201ENST00000299345 POGLUT1Q8NBL1 392 aa12.64□□□□□ -0.39
CDH8-201ENST00000299345 NEDD4LQ96PU5 975 aa12.64□□□□□ -0.39
CDH8-201ENST00000299345 PHOX2BQ99453 314 aa12.64□□□□□ -0.39
CDH8-201ENST00000299345 TRIM36Q9NQ86 728 aa12.64□□□□□ -0.39
CDH8-201ENST00000299345 C14orf105Q9NVL8 296 aa12.64□□□□□ -0.39
CDH8-201ENST00000299345 V9GYH0 126 aa12.64□□□□□ -0.39
CDH8-201ENST00000299345 B4DGG1 531 aa12.64□□□□□ -0.39
CDH8-201ENST00000299345 GABRPO00591 440 aa12.64□□□□□ -0.39
CDH8-201ENST00000299345 HCN1O60741 890 aa12.64□□□□□ -0.39
CDH8-201ENST00000299345 EFNB1P98172 346 aa12.64□□□□□ -0.39
CDH8-201ENST00000299345 QPRTQ15274 297 aa12.64□□□□□ -0.39
CDH8-201ENST00000299345 FCRLBQ6BAA4 426 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms