RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 AP1S1P61966 158 aa13.91□□□□□ -0.18
SPIDR-201ENST00000297423 SCRN3Q0VDG4 424 aa13.91□□□□□ -0.18
SPIDR-201ENST00000297423 C3orf38Q5JPI3 329 aa13.91□□□□□ -0.18
SPIDR-201ENST00000297423 IKBIPQ70UQ0 350 aa13.91□□□□□ -0.18
SPIDR-201ENST00000297423 GPR32P1Q8NGA4 272 aa13.91□□□□□ -0.18
SPIDR-201ENST00000297423 OR51A7Q8NH64 312 aa13.91□□□□□ -0.18
SPIDR-201ENST00000297423 PHOSPHO2Q8TCD6 241 aa13.91□□□□□ -0.18
SPIDR-201ENST00000297423 IFT27Q9BW83 186 aa13.91□□□□□ -0.18
SPIDR-201ENST00000297423 POLDIP3Q9BY77 421 aaKnown RBP13.91□□□□□ -0.18
SPIDR-201ENST00000297423 TRIM36Q9NQ86 728 aa13.91□□□□□ -0.18
SPIDR-201ENST00000297423 KLHL28Q9NXS3 571 aa13.91□□□□□ -0.18
SPIDR-201ENST00000297423 LHX3Q9UBR4 397 aa13.91□□□□□ -0.18
SPIDR-201ENST00000297423 PRKRAO75569 313 aaKnown RBP13.9□□□□□ -0.18
SPIDR-201ENST00000297423 FGF19O95750 216 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 LATS1O95835 1130 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 HSD3B1P14060 373 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 NAA10P41227 235 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-201ENST00000297423 ZNF311Q5JNZ3 666 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 PRICKLE2Q7Z3G6 844 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 LIX1LQ8IVB5 337 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 OR5J2Q8NH18 312 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 ECHDC3Q96DC8 303 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 MNTQ99583 582 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 TAS2R10Q9NYW0 307 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 FKBP7Q9Y680 259 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 NYNRINQ9P2P1 1898 aaKnown RBP13.9□□□□□ -0.18
SPIDR-201ENST00000297423 IRGMA1A4Y4 181 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 ANKRD61A6NGH8 418 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 LIPCP11150 499 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 PVALBP20472 110 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-201ENST00000297423 GRPRP30550 384 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 TRIM23P36406 574 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 GPR85P60893 370 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 GMFBP60983 142 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 RAE1P78406 368 aaKnown RBP13.9□□□□□ -0.18
SPIDR-201ENST00000297423 TPBGQ13641 420 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 ZNF273Q14593 569 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 METAP1DQ6UB28 335 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-201ENST00000297423 TMEM185AQ8NFB2 350 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 OR4D9Q8NGE8 314 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 ZCCHC2Q9C0B9 1178 aaKnown RBP13.9□□□□□ -0.18
SPIDR-201ENST00000297423 C20orf85Q9H1P6 137 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 TRAV20A0A0B4J274 112 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 LGI1O95970 557 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 FUT1P19526 365 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 UQCRC2P22695 453 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 SOX2P48431 317 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 Q6ZVU0 165 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 OR52L1Q8NGH7 329 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 OR2T4Q8NH00 348 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 ZDHHC1Q8WTX9 485 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 WNT2BQ93097 391 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 FATE1Q969F0 183 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 ZNF471Q9BX82 626 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-201ENST00000297423 CERS4Q9HA82 394 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 GPN1Q9HCN4 374 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-201ENST00000297423 AHSPQ9NZD4 102 aa13.9□□□□□ -0.18
SPIDR-201ENST00000297423 FAM74A7A6NL05 159 aa13.9□□□□□ -0.19
SPIDR-201ENST00000297423 GOSR2O14653 212 aa13.9□□□□□ -0.19
SPIDR-201ENST00000297423 TO15178 435 aa13.9□□□□□ -0.19
SPIDR-201ENST00000297423 RNF13O43567 381 aa13.9□□□□□ -0.19
SPIDR-201ENST00000297423 RPP14O95059 124 aaKnown RBP13.9□□□□□ -0.19
SPIDR-201ENST00000297423 STAT5AP42229 794 aa13.9□□□□□ -0.19
SPIDR-201ENST00000297423 NCBP2P52298 156 aaKnown RBP eCLIP13.9□□□□□ -0.19
SPIDR-201ENST00000297423 HCCSP53701 268 aa13.9□□□□□ -0.19
SPIDR-201ENST00000297423 FAM74A3Q4VXF1 159 aa13.9□□□□□ -0.19
SPIDR-201ENST00000297423 TP53I3Q53FA7 332 aa13.9□□□□□ -0.19
SPIDR-201ENST00000297423 ACSM3Q53FZ2 586 aa13.9□□□□□ -0.19
SPIDR-201ENST00000297423 PRPF38BQ5VTL8 546 aaKnown RBP13.9□□□□□ -0.19
SPIDR-201ENST00000297423 TTLQ8NG68 377 aa13.9□□□□□ -0.19
SPIDR-201ENST00000297423 OR5W2Q8NH69 310 aa13.9□□□□□ -0.19
SPIDR-201ENST00000297423 ADAMTS14Q8WXS8 1223 aa13.9□□□□□ -0.19
SPIDR-201ENST00000297423 WDR89Q96FK6 387 aaPredicted RBP13.9□□□□□ -0.19
SPIDR-201ENST00000297423 FCRL1Q96LA6 429 aa13.9□□□□□ -0.19
SPIDR-201ENST00000297423 ARHGAP9Q9BRR9 750 aa13.9□□□□□ -0.19
SPIDR-201ENST00000297423 IL21Q9HBE4 155 aa13.9□□□□□ -0.19
SPIDR-201ENST00000297423 HCFC1R1Q9NWW0 138 aa13.9□□□□□ -0.19
SPIDR-201ENST00000297423 LEFTY2O00292 366 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 FURINP09958 794 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 ADH7P40394 386 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 CTSOP43234 321 aaPredicted RBP13.89□□□□□ -0.19
SPIDR-201ENST00000297423 SSR2P43308 183 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 CTSCP53634 463 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 KRT33BQ14525 404 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 CCDC116Q8IYX3 515 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 MICU1Q9BPX6 476 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 SYNPO2LQ9H987 977 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 NOX3Q9HBY0 568 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 CUEDC1Q9NWM3 386 aaPredicted RBP13.89□□□□□ -0.19
SPIDR-201ENST00000297423 P2RX2Q9UBL9 471 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 MRPS23Q9Y3D9 190 aaKnown RBP13.89□□□□□ -0.19
SPIDR-201ENST00000297423 KCNE1BA0A087WTH5 132 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 SLC22A23A1A5C7 686 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 CREBL2O60519 120 aaPredicted RBP13.89□□□□□ -0.19
SPIDR-201ENST00000297423 SDC3O75056 442 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 PEX14O75381 377 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 ZNF821O75541 412 aaPredicted RBP13.89□□□□□ -0.19
SPIDR-201ENST00000297423 S100A6P06703 90 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 CBSLP0DN79 551 aa13.89□□□□□ -0.19
SPIDR-201ENST00000297423 CBSP35520 551 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms