RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 ST3GAL4Q11206 333 aa19.76■□□□□ 0.75
SOX17-201ENST00000297316 MRPL2Q5T653 305 aaKnown RBP19.76■□□□□ 0.75
SOX17-201ENST00000297316 UBE2UQ5VVX9 321 aa19.76■□□□□ 0.75
SOX17-201ENST00000297316 C16orf52Q8NHV5 167 aa19.76■□□□□ 0.75
SOX17-201ENST00000297316 TBC1D15Q8TC07 691 aa19.76■□□□□ 0.75
SOX17-201ENST00000297316 PTPMT1Q8WUK0 201 aaPredicted RBP19.76■□□□□ 0.75
SOX17-201ENST00000297316 NAT6Q93015 286 aa19.76■□□□□ 0.75
SOX17-201ENST00000297316 MYDGFQ969H8 173 aa19.76■□□□□ 0.75
SOX17-201ENST00000297316 TRIM45Q9H8W5 580 aaPredicted RBP19.76■□□□□ 0.75
SOX17-201ENST00000297316 DNAJC27Q9NZQ0 273 aa19.76■□□□□ 0.75
SOX17-201ENST00000297316 CTSFQ9UBX1 484 aa19.76■□□□□ 0.75
SOX17-201ENST00000297316 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.76■□□□□ 0.75
SOX17-201ENST00000297316 TOX3O15405 576 aaPredicted RBP19.75■□□□□ 0.75
SOX17-201ENST00000297316 PIP5K1CO60331 668 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 THBS1P07996 1170 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 IFI6P09912 130 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 CKMT1AP12532 417 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 TGFBR2P37173 567 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 ALDH6A1Q02252 535 aaKnown RBP19.75■□□□□ 0.75
SOX17-201ENST00000297316 ST3GAL3Q11203 375 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 ACSM5Q6NUN0 579 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 SLC41A3Q96GZ6 507 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 FAM46AQ96IP4 442 aaKnown RBP19.75■□□□□ 0.75
SOX17-201ENST00000297316 OR10A5Q9H207 317 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 SLC22A11Q9NSA0 550 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 ZNF232Q9UNY5 417 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 M0R082 166 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 GABARAPO95166 117 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 HTR2AP28223 471 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 MPLP40238 635 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 OMPP47874 163 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 FUT7Q11130 342 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 DOC2BQ14184 412 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 ZNF730Q6ZMV8 503 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 OR8D4Q8NGM9 314 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 TMEM255BQ8WV15 326 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 LMF2Q9BU23 707 aaKnown RBP19.75■□□□□ 0.75
SOX17-201ENST00000297316 APMAPQ9HDC9 416 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 TVP23BQ9NYZ1 205 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 RALGAPA1Q6GYQ0 2036 aa19.75■□□□□ 0.75
SOX17-201ENST00000297316 BRINP1O60477 761 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 PTHP01270 115 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 SNRPGP62308 76 aaKnown RBP19.74■□□□□ 0.75
SOX17-201ENST00000297316 LSM3P62310 102 aaKnown RBP19.74■□□□□ 0.75
SOX17-201ENST00000297316 COX10Q12887 443 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 GINS1Q14691 196 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 TBCEQ15813 527 aaPredicted RBP19.74■□□□□ 0.75
SOX17-201ENST00000297316 KIF26BQ2KJY2 2108 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 PHF19Q5T6S3 580 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 STX19Q8N4C7 294 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 LINC00471Q8N535 108 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 TCEANCQ8N8B7 351 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 ZNF615Q8N8J6 731 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 OR1F2PQ96R84 312 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 SLC25A19Q9HC21 320 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 CLN6Q9NWW5 311 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 PRKYO43930 277 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 MPZL2O60487 215 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 DBIP07108 87 aaKnown RBP19.74■□□□□ 0.75
SOX17-201ENST00000297316 SYPP08247 313 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 ANKRD34CP0C6C1 535 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 NID1P14543 1247 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 LIPAP38571 399 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 MLLT10P55197 1068 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 RHAGQ02094 409 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 IRF3Q14653 427 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 PWWP2BQ6NUJ5 590 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 Q6ZNX1 250 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 RABEPKQ7Z6M1 372 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 SENP5Q96HI0 755 aaPredicted RBP19.74■□□□□ 0.75
SOX17-201ENST00000297316 ITPAQ9BY32 194 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 SLC7A7Q9UM01 511 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 R4GN57 208 aa19.74■□□□□ 0.75
SOX17-201ENST00000297316 IGKV3D-11A0A0A0MRZ8 115 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 PRAMEF2O60811 474 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 CT45A8P0DMV1 189 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 CT45A9P0DMV2 189 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 SLC15A1P46059 708 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 ST13P50502 369 aaKnown RBP19.73■□□□□ 0.75
SOX17-201ENST00000297316 SERTAD2Q14140 314 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 CT45A2Q5DJT8 189 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 CASP12Q6UXS9 341 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 COX15Q7KZN9 410 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 SNRNP27Q8WVK2 155 aaKnown RBP19.73■□□□□ 0.75
SOX17-201ENST00000297316 RPL3LQ92901 407 aaKnown RBP19.73■□□□□ 0.75
SOX17-201ENST00000297316 LMF1Q96S06 567 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 PHOX2BQ99453 314 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 MESP1Q9BRJ9 268 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 SLC7A5P2Q9GIP4 190 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 CACYBPQ9HB71 228 aaKnown RBP19.73■□□□□ 0.75
SOX17-201ENST00000297316 OCIAD1Q9NX40 245 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 SH3D21A4FU49 640 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 CDHR4A6H8M9 788 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 OR5F1O95221 314 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 ADORA3P0DMS8 318 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 GIPRP48546 466 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 CDK5Q00535 292 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 ZNHIT3Q15649 155 aaPredicted RBP19.73■□□□□ 0.75
SOX17-201ENST00000297316 ZNF528Q3MIS6 628 aa19.73■□□□□ 0.75
SOX17-201ENST00000297316 TMEM201Q5SNT2 666 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms