RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 FBXO45P0C2W1 286 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 TNFSF4P23510 183 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 PBX2P40425 430 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 ANKRD54Q6NXT1 300 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 ASRGL1Q7L266 308 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 TREX1Q9NSU2 369 aa16.26■□□□□ 0.19
SHANK1-201ENST00000293441 C9orf135Q5VTT2 229 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 RRNAD1Q96FB5 475 aaKnown RBP16.25■□□□□ 0.19
SHANK1-201ENST00000293441 TCTN2Q96GX1 697 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 SACM1LQ9NTJ5 587 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 EEF1E1-BLOC1S5C9J1V9 151 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 RBPJQ06330 500 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 SNTB2Q13425 540 aaKnown RBP16.25■□□□□ 0.19
SHANK1-201ENST00000293441 COL28A1Q2UY09 1125 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 MS4A15Q8N5U1 240 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 ZIC5Q96T25 663 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 PITHD1Q9GZP4 211 aaPredicted RBP16.25■□□□□ 0.19
SHANK1-201ENST00000293441 HSFX1Q9UBD0 423 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 F5H0A9 414 aaPredicted RBP16.25■□□□□ 0.19
SHANK1-201ENST00000293441 NUDT21O43809 227 aaKnown RBP16.25■□□□□ 0.19
SHANK1-201ENST00000293441 TOXO94900 526 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 CD46P15529 392 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 PTPRRQ15256 657 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 TSPYL5Q86VY4 417 aaPredicted RBP16.25■□□□□ 0.19
SHANK1-201ENST00000293441 VRK2Q86Y07 508 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 OR5W2Q8NH69 310 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 PRSS16Q9NQE7 514 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 C12orf71A8MTZ7 269 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 IDUAP35475 653 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 RNASE10Q5GAN6 216 aaKnown RBP16.25■□□□□ 0.19
SHANK1-201ENST00000293441 MANEAQ5SRI9 462 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 B3GNT9Q6UX72 402 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 CENPSQ8N2Z9 138 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 OR5K2Q8NHB8 316 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 TBC1D20Q96BZ9 403 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 SLC6A17Q9H1V8 727 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 POLHQ9Y253 713 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 HSPE1-MOB4S4R3N1 261 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 DCDC2BA2VCK2 349 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 SORBS2O94875 1100 aaKnown RBP16.25■□□□□ 0.19
SHANK1-201ENST00000293441 EGFP01133 1207 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 AMY2AP04746 511 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 RPS17P08708 135 aaKnown RBP16.25■□□□□ 0.19
SHANK1-201ENST00000293441 GLO1Q04760 184 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 MLF2Q15773 248 aaPredicted RBP16.25■□□□□ 0.19
SHANK1-201ENST00000293441 SFRP4Q6FHJ7 346 aaPredicted RBP16.25■□□□□ 0.19
SHANK1-201ENST00000293441 DTWD1Q8N5C7 304 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 VN1R2Q8NFZ6 395 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 CDC6Q99741 560 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 NTMT1Q9BV86 223 aa16.25■□□□□ 0.19
SHANK1-201ENST00000293441 TRAV27A0A087WT01 109 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 LRRTM2O43300 516 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 PRKYO43930 277 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 UGT2B7P16662 529 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 C19orf47Q8N9M1 422 aaKnown RBP16.24■□□□□ 0.19
SHANK1-201ENST00000293441 OR2A12Q8NGT7 310 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 BTBD2Q9BX70 525 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 SLAMF7Q9NQ25 335 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 HIST1H1TP22492 207 aaPredicted RBP16.24■□□□□ 0.19
SHANK1-201ENST00000293441 GABARAPL2P60520 117 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 ZNF181Q2M3W8 571 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 CPZQ66K79 652 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 ARL14Q8N4G2 192 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 NUDT22Q9BRQ3 303 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 INIPQ9NRY2 104 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 AHDC1Q5TGY3 1603 aaPredicted RBP16.24■□□□□ 0.19
SHANK1-201ENST00000293441 H0YGG7 62 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 EPHA1P21709 976 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 HTR3AP46098 478 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 ALKAL1Q6UXT8 129 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 ST6GALNAC5Q9BVH7 336 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 CHRDQ9H2X0 955 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 SDR39U1Q9NRG7 319 aaPredicted RBP16.24■□□□□ 0.19
SHANK1-201ENST00000293441 PCDHB10Q9UN67 800 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 TRAV18A0A075B6X5 111 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 TFPTP0C1Z6 253 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 PTH2RP49190 550 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 OR13J1Q8NGT2 312 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 CHPT1Q8WUD6 406 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 OR10A5Q9H207 317 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 OR10A2Q9H208 303 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 MPIG6BO95866 241 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 LCKP06239 509 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 MMP2P08253 660 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 DCTP40126 519 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 BEST3Q8N1M1 668 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 ARL5BQ96KC2 179 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 GOLM1Q8NBJ4 401 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 EDAQ92838 391 aa16.24■□□□□ 0.19
SHANK1-201ENST00000293441 PLSCR5A0PG75 271 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 SIGLEC6O43699 453 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 AGBL5Q8NDL9 886 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 C16orf58Q96GQ5 468 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 ZBP1Q9H171 429 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 PLEKHJ1Q9NW61 149 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 BOKQ9UMX3 212 aaPredicted RBP16.23■□□□□ 0.19
SHANK1-201ENST00000293441 OR2T1O43869 369 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 CPMP14384 443 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 ACPPP15309 386 aa16.23■□□□□ 0.19
SHANK1-201ENST00000293441 RAB3AP20336 220 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms