RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 GABRA4P48169 554 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 SEPHS1P49903 392 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 FAM53BQ14153 422 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 MRGPREQ86SM8 312 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 FAM174AQ8TBP5 190 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 S100ZQ8WXG8 99 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 OSTF1Q92882 214 aa17.86■□□□□ 0.45
BRAF-201ENST00000288602 DIMT1Q9UNQ2 313 aaKnown RBP17.86■□□□□ 0.45
BRAF-201ENST00000288602 CABIN1Q9Y6J0 2220 aa17.85■□□□□ 0.45
BRAF-201ENST00000288602 SEC16AO15027 2179 aa17.85■□□□□ 0.45
BRAF-201ENST00000288602 SULT1C4O75897 302 aa17.85■□□□□ 0.45
BRAF-201ENST00000288602 ZGLP1P0C6A0 271 aa17.85■□□□□ 0.45
BRAF-201ENST00000288602 CD79BP40259 229 aa17.85■□□□□ 0.45
BRAF-201ENST00000288602 MTNR1AP48039 350 aa17.85■□□□□ 0.45
BRAF-201ENST00000288602 FNTBP49356 437 aa17.85■□□□□ 0.45
BRAF-201ENST00000288602 PRAMEF17Q5VTA0 474 aa17.85■□□□□ 0.45
BRAF-201ENST00000288602 SMARCD3Q6STE5 483 aa17.85■□□□□ 0.45
BRAF-201ENST00000288602 PROKR2Q8NFJ6 384 aa17.85■□□□□ 0.45
BRAF-201ENST00000288602 TMEM239Q8WW34 195 aa17.85■□□□□ 0.45
BRAF-201ENST00000288602 GATAD2BQ8WXI9 593 aa17.85■□□□□ 0.45
BRAF-201ENST00000288602 TMEM203Q969S6 136 aa17.85■□□□□ 0.45
BRAF-201ENST00000288602 PALMDQ9NP74 551 aa17.85■□□□□ 0.45
BRAF-201ENST00000288602 ERVK-19Q9WJR5 959 aa17.85■□□□□ 0.45
BRAF-201ENST00000288602 CTNSO60931 367 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 LYPD3O95274 346 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 IFI30P13284 250 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 FXYD6P3P58550 94 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 SNAP47Q5SQN1 464 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 NPSR1Q6W5P4 371 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 RCBTB1Q8NDN9 531 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 KBTBD8Q8NFY9 601 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 DGAT2Q96PD7 388 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 UNC13CQ8NB66 2214 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 COQ9O75208 318 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 NSA2O95478 260 aaKnown RBP17.84■□□□□ 0.45
BRAF-201ENST00000288602 IFNA16P05015 189 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 GCGRP47871 477 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 RGS21Q2M5E4 152 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 PGGHGQ32M88 737 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 SLC35F1Q5T1Q4 408 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 LHFPL3Q86UP9 236 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 AMER2Q8N7J2 671 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 OR4F15Q8NGB8 312 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 OR51Q1Q8NH59 317 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 HLA-CQ95604 372 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 YIPF2Q9BWQ6 316 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.84■□□□□ 0.45
BRAF-201ENST00000288602 MRPS17Q9Y2R5 130 aaKnown RBP17.84■□□□□ 0.45
BRAF-201ENST00000288602 CEP192Q8TEP8 1941 aa17.84■□□□□ 0.45
BRAF-201ENST00000288602 LILRA5A6NI73 299 aa17.83■□□□□ 0.45
BRAF-201ENST00000288602 RFPL3O75679 317 aa17.83■□□□□ 0.45
BRAF-201ENST00000288602 HNRNPCP07910 306 aaKnown RBP eCLIP17.83■□□□□ 0.45
BRAF-201ENST00000288602 CDH11P55287 796 aa17.83■□□□□ 0.45
BRAF-201ENST00000288602 OR1D5P58170 312 aa17.83■□□□□ 0.45
BRAF-201ENST00000288602 HNRNPKP61978 463 aaKnown RBP eCLIP17.83■□□□□ 0.453e-7■■□□□ 13.4
BRAF-201ENST00000288602 ZNHIT3Q15649 155 aaPredicted RBP17.83■□□□□ 0.45
BRAF-201ENST00000288602 NDUFAF6Q330K2 333 aa17.83■□□□□ 0.45
BRAF-201ENST00000288602 AMZ1Q400G9 498 aa17.83■□□□□ 0.45
BRAF-201ENST00000288602 CADM4Q8NFZ8 388 aa17.83■□□□□ 0.45
BRAF-201ENST00000288602 CLIP3Q96DZ5 547 aa17.83■□□□□ 0.45
BRAF-201ENST00000288602 VSTM2LQ96N03 204 aa17.83■□□□□ 0.45
BRAF-201ENST00000288602 OR52D1Q9H346 318 aa17.83■□□□□ 0.45
BRAF-201ENST00000288602 PDE7BQ9NP56 450 aa17.83■□□□□ 0.45
BRAF-201ENST00000288602 QPCTLQ9NXS2 382 aa17.83■□□□□ 0.45
BRAF-201ENST00000288602 FLRT3Q9NZU0 649 aa17.83■□□□□ 0.45
BRAF-201ENST00000288602 ZNF223Q9UK11 482 aaPredicted RBP17.83■□□□□ 0.45
BRAF-201ENST00000288602 PLCL2Q9UPR0 1127 aa17.83■□□□□ 0.45
BRAF-201ENST00000288602 MRPS33Q9Y291 106 aaKnown RBP17.83■□□□□ 0.45
BRAF-201ENST00000288602 RNF215Q9Y6U7 377 aa17.83■□□□□ 0.45
BRAF-201ENST00000288602 FRYLO94915 3013 aa17.83■□□□□ 0.44
BRAF-201ENST00000288602 LMO7DNF2Z398 122 aa17.83■□□□□ 0.44
BRAF-201ENST00000288602 SOX1O00570 391 aaPredicted RBP17.83■□□□□ 0.44
BRAF-201ENST00000288602 GNB5O14775 395 aa17.83■□□□□ 0.44
BRAF-201ENST00000288602 HYAL3O43820 417 aaPredicted RBP17.83■□□□□ 0.44
BRAF-201ENST00000288602 OCM2P0CE71 109 aa17.83■□□□□ 0.44
BRAF-201ENST00000288602 OCMP0CE72 109 aaPredicted RBP17.83■□□□□ 0.44
BRAF-201ENST00000288602 ZNF12P17014 697 aa17.83■□□□□ 0.44
BRAF-201ENST00000288602 NXPH1P58417 271 aa17.83■□□□□ 0.44
BRAF-201ENST00000288602 KLHL22Q53GT1 634 aa17.83■□□□□ 0.44
BRAF-201ENST00000288602 OR2T33Q8NG76 320 aa17.83■□□□□ 0.44
BRAF-201ENST00000288602 NACC2Q96BF6 587 aa17.83■□□□□ 0.44
BRAF-201ENST00000288602 KCNS3Q9BQ31 491 aa17.83■□□□□ 0.44
BRAF-201ENST00000288602 MMP27Q9H306 513 aa17.83■□□□□ 0.44
BRAF-201ENST00000288602 UBQLN3Q9H347 655 aa17.83■□□□□ 0.44
BRAF-201ENST00000288602 MED20Q9H944 212 aa17.83■□□□□ 0.44
BRAF-201ENST00000288602 SIDT1Q9NXL6 827 aaKnown RBP17.83■□□□□ 0.44
BRAF-201ENST00000288602 LRIT1Q9P2V4 623 aa17.83■□□□□ 0.44
BRAF-201ENST00000288602 YARS2Q9Y2Z4 477 aaKnown RBP17.83■□□□□ 0.44
BRAF-201ENST00000288602 CDH10Q9Y6N8 788 aa17.83■□□□□ 0.44
BRAF-201ENST00000288602 UNC119BA6NIH7 251 aa17.82■□□□□ 0.44
BRAF-201ENST00000288602 RHPN2P1A8MT19 583 aa17.82■□□□□ 0.44
BRAF-201ENST00000288602 KDM4EB2RXH2 506 aaPredicted RBP17.82■□□□□ 0.44
BRAF-201ENST00000288602 CLDN4O14493 209 aa17.82■□□□□ 0.44
BRAF-201ENST00000288602 SOCS6O14544 535 aa17.82■□□□□ 0.44
BRAF-201ENST00000288602 AK1P00568 194 aa17.82■□□□□ 0.44
BRAF-201ENST00000288602 MYL12AP19105 171 aa17.82■□□□□ 0.44
BRAF-201ENST00000288602 ALAS2P22557 587 aa17.82■□□□□ 0.44
BRAF-201ENST00000288602 CRYBB2P43320 205 aa17.82■□□□□ 0.44
BRAF-201ENST00000288602 C1DQ13901 141 aaKnown RBP17.82■□□□□ 0.44
BRAF-201ENST00000288602 MINDY4Q4G0A6 757 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms