RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 IDUAP35475 653 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 ADPRHP54922 357 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 RSU1Q15404 277 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 GGTA1PQ4G0N0 100 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 MANEAQ5SRI9 462 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 ZMYND19Q96E35 227 aaPredicted RBP17.39■□□□□ 0.37
PCDH1-201ENST00000287008 SEMA6CQ9H3T2 930 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 ARMC1Q9NVT9 282 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 SLC6A14Q9UN76 642 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 RRP8O43159 456 aaKnown RBP17.39■□□□□ 0.37
PCDH1-201ENST00000287008 MITFO75030 526 aaPredicted RBP17.39■□□□□ 0.37
PCDH1-201ENST00000287008 ZNF182P17025 639 aaPredicted RBP17.39■□□□□ 0.37
PCDH1-201ENST00000287008 AMY2BP19961 511 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 HBA1P69905 142 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 C14orf28Q4W4Y0 310 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 WBP2NLQ6ICG8 309 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 SYNPOQ8N3V7 929 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 SLC37A2Q8TED4 501 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 OR1E3Q8WZA6 343 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 LGALS12Q96DT0 336 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 ENKD1Q9H0I2 346 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 DNTTIP1Q9H147 329 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 LIN28AQ9H9Z2 209 aaKnown RBP17.39■□□□□ 0.37
PCDH1-201ENST00000287008 TCRBV5S1A1TA0A578 114 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 SLC1A7O00341 560 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 SLC33A1O00400 549 aaPredicted RBP17.39■□□□□ 0.37
PCDH1-201ENST00000287008 LSM1O15116 133 aaKnown RBP17.39■□□□□ 0.37
PCDH1-201ENST00000287008 MAS1P04201 325 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 PBX2P40425 430 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 TMBIM6P55061 237 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 HOXC5Q00444 222 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 TNFRSF17Q02223 184 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 MOGQ16653 247 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 HIF3AQ9Y2N7 669 aa17.39■□□□□ 0.37
PCDH1-201ENST00000287008 SMAD9O15198 467 aaKnown RBP17.38■□□□□ 0.37
PCDH1-201ENST00000287008 GABRB3P28472 473 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 KIAA1024LP59773 190 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 GPLD1P80108 840 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 TSC22D1Q15714 1073 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 GARNL3Q5VVW2 1013 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 ZNF740Q8NDX6 193 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 PDXPQ96GD0 296 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 CLMPQ9H6B4 373 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 ACOT13Q9NPJ3 140 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 GPR83Q9NYM4 423 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 ZNF175Q9Y473 711 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 ZNF850A8MQ14 1090 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 PRKYO43930 277 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 OPN1LWP04000 364 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 SOX3P41225 446 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 PITPNBP48739 271 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.38■□□□□ 0.37
PCDH1-201ENST00000287008 ZNF704Q6ZNC4 412 aaPredicted RBP17.38■□□□□ 0.37
PCDH1-201ENST00000287008 IGFN1Q86VF2 1251 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 UBALD2Q8IYN6 164 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 ADAMTS16Q8TE57 1224 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 ZFPM2Q8WW38 1151 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 BEX2Q9BXY8 128 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 C6orf106Q9H6K1 298 aaPredicted RBP17.38■□□□□ 0.37
PCDH1-201ENST00000287008 BEX1Q9HBH7 125 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 CSNK1G3Q9Y6M4 447 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 MYH4Q9Y623 1939 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 S100A6P06703 90 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 BCL7AQ4VC05 210 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 SLC37A3Q8NCC5 494 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 HAVCR2Q8TDQ0 301 aa17.38■□□□□ 0.37
PCDH1-201ENST00000287008 MAP4K2Q12851 820 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 GRK1Q15835 563 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 SYPL1Q16563 259 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 GRAMD2AQ8IUY3 354 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 SLC25A44Q96H78 314 aaPredicted RBP17.37■□□□□ 0.37
PCDH1-201ENST00000287008 WDR83Q9BRX9 315 aaKnown RBP17.37■□□□□ 0.37
PCDH1-201ENST00000287008 HCAR1Q9BXC0 346 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 MYH14Q7Z406 1995 aaKnown RBP17.37■□□□□ 0.37
PCDH1-201ENST00000287008 SCN9AQ15858 1988 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 ZSCAN5BA6NJL1 495 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 RGS9O75916 674 aaPredicted RBP17.37■□□□□ 0.37
PCDH1-201ENST00000287008 MS4A2Q01362 244 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 OR5AK2Q8NH90 309 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 FAM71F1Q96KD3 344 aaPredicted RBP17.37■□□□□ 0.37
PCDH1-201ENST00000287008 SPHK1Q9NYA1 384 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 CARD8Q9Y2G2 431 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 A0A1B0GVC2 190 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 PRRT4C9JH25 899 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 ZNF45Q02386 682 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 TMEM236Q5W0B7 351 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 TRMT10AQ8TBZ6 339 aaKnown RBP17.37■□□□□ 0.37
PCDH1-201ENST00000287008 OR7A10O76100 309 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 KCNK5O95279 499 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 STOMP27105 288 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 MARVELD2Q8N4S9 558 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 FRS2Q8WU20 508 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 LINC01599Q8WXQ3 324 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 GTF2H4Q92759 462 aa17.37■□□□□ 0.37
PCDH1-201ENST00000287008 VIRMAQ69YN4 1812 aaKnown RBP17.37■□□□□ 0.37
PCDH1-201ENST00000287008 YY2O15391 372 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 ZNF264O43296 627 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 PLEKHN1Q494U1 663 aaPredicted RBP17.36■□□□□ 0.37
PCDH1-201ENST00000287008 AFMIDQ63HM1 303 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 TMEM53Q6P2H8 277 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms