RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 MYOD1P15172 320 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 RBMS1P29558 406 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 AHRP35869 848 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 ARPC4P59998 168 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SF3B4Q15427 424 aaKnown RBP eCLIP2.5□□□□□ -2.015e-8■■■■■ 36.4
CHD1-201ENST00000284049 DPY19L2P2Q6ZN68 376 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SLC16A14Q7RTX9 510 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 METTL27Q8N6F8 245 aaPredicted RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 NPEPL1Q8NDH3 523 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 OR9A1PQ8NGU1 263 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 HSD17B8Q92506 261 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 MS4A14Q96JA4 679 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 GPR137Q96N19 417 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 PELOQ9BRX2 385 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 TAS2R16Q9NYV7 291 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 LNPEPQ9UIQ6 1025 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 GGA2Q9UJY4 613 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 WIPI2Q9Y4P8 454 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 A0A0J9YYE9 177 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 TMEM191CA6NGB0 347 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 E7EWF7 191 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 EML2O95834 649 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 TRBC1P01850 177 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 TMEM191BP0C7N4 346 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SYT1P21579 422 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 TSFMP43897 325 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 OR3A1P47881 315 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 LINC00310P59036 64 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 PITX1P78337 314 aaPredicted RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 MAB21L1Q13394 359 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 ARTNQ5T4W7 220 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 OR4F3Q6IEY1 312 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 PIGZQ86VD9 579 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 CATSPERDQ86XM0 798 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 CDKL3Q8IVW4 592 aaPredicted RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 OR51L1Q8NGJ5 315 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 GPX8Q8TED1 209 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 OR1E3Q8WZA6 343 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 PIK3R3Q92569 461 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 MAP4K1Q92918 833 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 RBM41Q96IZ5 413 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 JSRP1Q96MG2 331 aaPredicted RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 PANX1Q96RD7 426 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 EGLN1Q9GZT9 426 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 FBXO44Q9H4M3 255 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SLC38A10Q9HBR0 1119 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SLC25A19Q9HC21 320 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 GPR83Q9NYM4 423 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 CNOT11Q9UKZ1 510 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 LRIT2A6NDA9 550 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 PRR23AA6NEV1 266 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 CREG1O75629 220 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 NDUFB8O95169 186 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 ITGB2P05107 769 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 CLTAP09496 248 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 CT45A8P0DMV1 189 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 CT45A9P0DMV2 189 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 ATP1B2P14415 290 aaPredicted RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 JUNBP17275 347 aaPredicted RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 HNF1AP20823 631 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 UGT1A4P22310 534 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 UGT1A3P35503 534 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SOX2P48431 317 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 CTTNQ14247 550 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 ANKRD55Q3KP44 614 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 MIDNQ504T8 468 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 CT45A2Q5DJT8 189 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 XKR6Q5GH73 641 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 C6orf226Q5I0X4 101 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 TRMT1LQ7Z2T5 733 aaKnown RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 GTPBP8Q8N3Z3 284 aaPredicted RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 TTC29Q8NA56 475 aaPredicted RBP2.5□□□□□ -2.01
CHD1-201ENST00000284049 B3GNT7Q8NFL0 401 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 OR4D10Q8NGI6 311 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 OR52I1Q8NGK6 324 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 GPR151Q8TDV0 419 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SLC35C1Q96A29 364 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 OR5B2Q96R09 309 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 RAB11FIP5Q9BXF6 653 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 SEMA5BQ9P283 1151 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 XDHP47989 1333 aa2.5□□□□□ -2.01
CHD1-201ENST00000284049 C5orf60A6NFR6 353 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 SCAMP2O15127 329 aaKnown RBP2.49□□□□□ -2.01
CHD1-201ENST00000284049 P04436 131 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 PCMT1P22061 227 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 CDH5P33151 784 aaPredicted RBP2.49□□□□□ -2.01
CHD1-201ENST00000284049 RAB9AP51151 201 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 NDST2P52849 883 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 TUBA4AP68366 448 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 SLC10A7Q0GE19 358 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 TRAF2Q12933 501 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 MICBQ29980 383 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 GGTA1PQ4G0N0 100 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 PAN3Q58A45 887 aaKnown RBP2.49□□□□□ -2.01
CHD1-201ENST00000284049 C1QL3Q5VWW1 255 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 SLC22A10Q63ZE4 541 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 TCEAL6Q6IPX3 200 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 PARM1Q6UWI2 310 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 CYP4Z1Q86W10 505 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms