RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 INTS12Q96CB8 462 aaKnown RBP13.01□□□□□ -0.33
HMGN3-201ENST00000275036 SH3YL1Q96HL8 342 aaPredicted RBP13.01□□□□□ -0.33
HMGN3-201ENST00000275036 GPATCH1Q9BRR8 931 aaKnown RBP13.01□□□□□ -0.33
HMGN3-201ENST00000275036 LIME1Q9H400 295 aa13.01□□□□□ -0.33
HMGN3-201ENST00000275036 WDR55Q9H6Y2 383 aaPredicted RBP13.01□□□□□ -0.33
HMGN3-201ENST00000275036 THAP1Q9NVV9 213 aa13.01□□□□□ -0.33
HMGN3-201ENST00000275036 MARCOQ9UEW3 520 aaPredicted RBP13.01□□□□□ -0.33
HMGN3-201ENST00000275036 ZNF469Q96JG9 3925 aaPredicted RBP13.01□□□□□ -0.33
HMGN3-201ENST00000275036 GOLGA8QA0A0J9YX86 632 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 A0A1W2PQD3 144 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 FAM221AA4D161 298 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 GOLGA8OA6NCC3 632 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 NPIPB9F8W1W9 429 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 GOLGA8NF8WBI6 632 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 H3BML4 177 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 SEC14L5O43304 696 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 IL18BPO95998 194 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 C1QCP02747 245 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 KITP10721 976 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 EPHA3P29320 983 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 IL12AP29459 219 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 OPRM1P35372 400 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 KIR2DL3P43628 341 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 CASP9P55211 416 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 NME5P56597 212 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 OCRLQ01968 901 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 GLYR1Q49A26 553 aaPredicted RBP13□□□□□ -0.33
HMGN3-201ENST00000275036 SPANXN4Q5MJ08 99 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 OLIG3Q7RTU3 272 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 C6orf120Q7Z4R8 191 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 GRAMD2AQ8IUY3 354 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 WDR75Q8IWA0 830 aaKnown RBP13□□□□□ -0.33
HMGN3-201ENST00000275036 FIG4Q92562 907 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 TESCQ96BS2 214 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 TM9SF2Q99805 663 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 PIGQQ9BRB3 760 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 AIG1Q9NVV5 245 aa13□□□□□ -0.33
HMGN3-201ENST00000275036 FAF1Q9UNN5 650 aaPredicted RBP13□□□□□ -0.33
HMGN3-201ENST00000275036 FREM1Q5H8C1 2179 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 RNF103-CHMP3A0A140T963 221 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 EEF1E1-BLOC1S5C9J1V9 151 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 C9JVG2 144 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 SCDO00767 359 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 HDAC3O15379 428 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 EEF1E1O43324 174 aaKnown RBP12.99□□□□□ -0.33
HMGN3-201ENST00000275036 TNFSF13O75888 250 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 CPSF4O95639 269 aaKnown RBP12.99□□□□□ -0.33
HMGN3-201ENST00000275036 KRT16P08779 473 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 MATN1P21941 496 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 PSMA4P25789 261 aaKnown RBP12.99□□□□□ -0.33
HMGN3-201ENST00000275036 DNAJA1P31689 397 aaKnown RBP12.99□□□□□ -0.33
HMGN3-201ENST00000275036 UFM1P61960 85 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 ZNF117Q03924 483 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 PLPPR5Q32ZL2 321 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 FAM174BQ3ZCQ3 159 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 FLYWCH1Q4VC44 716 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 KLHL26Q53HC5 615 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 CBLN3Q6UW01 205 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 MAVSQ7Z434 540 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 GGNQ86UU5 652 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 MEIOBQ8N635 442 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 OR4A15Q8NGL6 344 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 GOT1L1Q8NHS2 421 aaPredicted RBP12.99□□□□□ -0.33
HMGN3-201ENST00000275036 RAB3IL1Q8TBN0 382 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 POC1BQ8TC44 478 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 SMPDL3BQ92485 455 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 ZNF524Q96C55 264 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 ZNF845Q96IR2 970 aaPredicted RBP12.99□□□□□ -0.33
HMGN3-201ENST00000275036 ZFP3Q96NJ6 502 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 SDF2Q99470 211 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 SFXN3Q9BWM7 321 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 MANSC1Q9H8J5 431 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 MED17Q9NVC6 651 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 NKIRAS1Q9NYS0 192 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 VPS13CQ709C8 3753 aa12.99□□□□□ -0.33
HMGN3-201ENST00000275036 CENPVL1A0A0U1RR11 272 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 PRSS51A0A1B0GVH4 220 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 A0A1W2PNV4 684 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 E9PBE3 544 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 LINC01387J3KSC0 135 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 HAX1O00165 279 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 ZNF195O14628 629 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 HPGDP15428 266 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 ZNF17P17021 662 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 ATP6V1C1P21283 382 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 NDUFAF6Q330K2 333 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 SLC9B1Q4ZJI4 515 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 AGBL2Q5U5Z8 902 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 ATG16L1Q676U5 607 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 LUZP2Q86TE4 346 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 MISPQ8IVT2 679 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 GTPBP8Q8N3Z3 284 aaPredicted RBP12.98□□□□□ -0.33
HMGN3-201ENST00000275036 METTL25Q8N6Q8 603 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 CHDHQ8NE62 594 aaPredicted RBP12.98□□□□□ -0.33
HMGN3-201ENST00000275036 B4GALNT2Q8NHY0 566 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 LINC01560Q8TB33 94 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 PHOSPHO1Q8TCT1 267 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 ACTRT2Q8TDY3 377 aa12.98□□□□□ -0.33
HMGN3-201ENST00000275036 MAELQ96JY0 434 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms