RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 CBLN2Q8IUK8 224 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 FAM26EQ8N5C1 309 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 OR52I2Q8NH67 350 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 PAQR8Q8TEZ7 354 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 DNAJA3Q96EY1 480 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 EVA1AQ9H8M9 152 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 TRPV4Q9HBA0 871 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 PRKAG2Q9UGJ0 569 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 MYO9BQ13459 2157 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 AGAP14A8MT82 685 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 H7BY64 318 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 KLKB1P03952 638 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 HMGN1P05114 100 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 CCR8P51685 355 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 LUMP51884 338 aaPredicted RBP15.26■□□□□ 0.03
GPC1-201ENST00000264039 GSG1Q2KHT4 349 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 PRAMEF17Q5VTA0 474 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 SHEQ5VZ18 495 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 TXNDC8Q6A555 127 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 VASNQ6EMK4 673 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 PRICKLE2Q7Z3G6 844 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 ZNF546Q86UE3 836 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 SCARB1Q8WTV0 552 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 SAMD11Q96NU1 681 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 PRAP1Q96NZ9 151 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 F5H5P2 479 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 KHNYNO15037 678 aaKnown RBP15.26■□□□□ 0.03
GPC1-201ENST00000264039 PRAMEF2O60811 474 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 ARL6IP5O75915 188 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 RBM39Q14498 530 aaKnown RBP15.26■□□□□ 0.03
GPC1-201ENST00000264039 TRAM2Q15035 370 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 KRBOX4Q5JUW0 171 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 UNQ6126/PRO20091Q6UXV3 157 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 DEFB132Q7Z7B7 95 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 OAFQ86UD1 273 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 CHCHD4Q8N4Q1 142 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 L3MBTL4Q8NA19 623 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 LINC01599Q8WXQ3 324 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 OSTF1Q92882 214 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 ZMYND19Q96E35 227 aaPredicted RBP15.26■□□□□ 0.03
GPC1-201ENST00000264039 GPR62Q9BZJ7 368 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 SLC25A19Q9HC21 320 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 GPATCH2Q9NW75 528 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 LSM2Q9Y333 95 aaKnown RBP15.26■□□□□ 0.03
GPC1-201ENST00000264039 C5orf51A6NDU8 294 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 GPR31O00270 319 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 PRKRAO75569 313 aaKnown RBP15.25■□□□□ 0.03
GPC1-201ENST00000264039 LAMP2P13473 410 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 ZNF14P17017 642 aaPredicted RBP15.25■□□□□ 0.03
GPC1-201ENST00000264039 MAOBP27338 520 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 SEC61A1P61619 476 aaKnown RBP15.25■□□□□ 0.03
GPC1-201ENST00000264039 PCGF3Q3KNV8 242 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 ZNF792Q3KQV3 632 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 FAM209BQ5JX69 171 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 ZNF783Q6ZMS7 281 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 TPRG1Q6ZUI0 275 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 BTN2A1Q7KYR7 527 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 PXT1Q8NFP0 134 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 FUBP3Q96I24 572 aaKnown RBP eCLIP15.25■□□□□ 0.03
GPC1-201ENST00000264039 GPR174Q9BXC1 333 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 OR2AG1Q9H205 316 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 GHITMQ9H3K2 345 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 SUV39H2Q9H5I1 410 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 TMEM129A0AVI4 362 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 FUT1P19526 365 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 RAP2BP61225 183 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 OCLNQ16625 522 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 YOD1Q5VVQ6 348 aaPredicted RBP15.25■□□□□ 0.03
GPC1-201ENST00000264039 TMEM99Q8N816 258 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 OR10Z1Q8NGY1 313 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 WFDC6Q9BQY6 131 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 DNTTIP1Q9H147 329 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 NTMQ9P121 344 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 MEIKINA0A087WXM9 373 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 LRIT2A6NDA9 550 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 QSOX1O00391 747 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 IGF2P01344 180 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 ANXA2P07355 339 aaKnown RBP15.25■□□□□ 0.03
GPC1-201ENST00000264039 AKR1C3P42330 323 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 E2F1Q01094 437 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 GDF6Q6KF10 455 aaPredicted RBP15.25■□□□□ 0.03
GPC1-201ENST00000264039 ABHD4Q8TB40 342 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 GNPDA2Q8TDQ7 276 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 CYSLTR2Q9NS75 346 aa15.25■□□□□ 0.03
GPC1-201ENST00000264039 RBBP6Q7Z6E9 1792 aaKnown RBP15.24■□□□□ 0.03
GPC1-201ENST00000264039 A0A087WUU8 490 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 STC2O76061 302 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 SOX30O94993 753 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 MAS1P04201 325 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 FURINP09958 794 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 SKP1P63208 163 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 PLA1AQ53H76 456 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 ZNF322Q6U7Q0 402 aaPredicted RBP15.24■□□□□ 0.03
GPC1-201ENST00000264039 TMPRSS12Q86WS5 348 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 KLHDC8BQ8IXV7 354 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 PDCD1LG2Q9BQ51 273 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 KLHL9Q9P2J3 617 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 UBR3Q6ZT12 1888 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 CHD5Q8TDI0 1954 aa15.24■□□□□ 0.03
GPC1-201ENST00000264039 RPS10-NUDT3A0A1W2PQS6 291 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms