RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 TESQ9UGI8 421 aaKnown RBP21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 EP300Q09472 2414 aaPredicted RBP21.07■□□□□ 0.96
SMARCB1-201ENST00000263121 TMEM200CA6NKL6 621 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 TM4SF5O14894 197 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 ABCB7O75027 752 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 REM1O75628 298 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 CYP7B1O75881 506 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 ITGAMP11215 1152 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 COX6A1P12074 109 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 CYP4B1P13584 511 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 TCN2P20062 427 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 TBXA2RP21731 343 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 MMP11P24347 488 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 HTR2AP28223 471 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 ADH7P40394 386 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 ST3GAL3Q11203 375 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 FNDC7Q5VTL7 733 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 PODNL1Q6PEZ8 512 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 ASCL5Q7RTU5 278 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 ESX1Q8N693 406 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 ZNF527Q8NB42 609 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 LIN28AQ9H9Z2 209 aaKnown RBP21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 TCFL5Q9UL49 500 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 SDK2Q58EX2 2172 aa21.06■□□□□ 0.96
SMARCB1-201ENST00000263121 TNFSF15O95150 251 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 THY1P04216 161 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 CDH2P19022 906 aaPredicted RBP21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 IL12BP29460 328 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 IFNA8P32881 189 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 KRT20P35900 424 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 PNLIPRP2P54317 469 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 FOXD4Q12950 439 aaPredicted RBP21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 TRAM2Q15035 370 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 TTC23Q5W5X9 447 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 AQP11Q8NBQ7 271 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 IMMP1LQ96LU5 166 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 NIPSNAP1Q9BPW8 284 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 SLC35A3Q9Y2D2 325 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 WDFY3Q8IZQ1 3526 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 SOCS6O14544 535 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 SLC16A6O15403 523 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 CLIC3O95833 236 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 POLR2IP36954 125 aaKnown RBP21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 ACAA2P42765 397 aaKnown RBP21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 KIRREL2Q6UWL6 708 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 GDF7Q7Z4P5 450 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 TMPRSS12Q86WS5 348 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 LINC00471Q8N535 108 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 FAM71CQ8NEG0 241 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 ZNF555Q8NEP9 628 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 OR5L2Q8NGL0 311 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 ELP5Q8TE02 316 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 SLC41A3Q96GZ6 507 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 PHOX2BQ99453 314 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 GABARAPL3Q9BY60 117 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 PAPOLBQ9NRJ5 636 aaKnown RBP21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 POFUT2Q9Y2G5 429 aa21.05■□□□□ 0.96
SMARCB1-201ENST00000263121 ADAM11O75078 769 aa21.04■□□□□ 0.96
SMARCB1-201ENST00000263121 ICOSLGO75144 302 aa21.04■□□□□ 0.96
SMARCB1-201ENST00000263121 ZFAND5O76080 213 aa21.04■□□□□ 0.96
SMARCB1-201ENST00000263121 CSTAP01040 98 aa21.04■□□□□ 0.96
SMARCB1-201ENST00000263121 GASTP01350 101 aa21.04■□□□□ 0.96
SMARCB1-201ENST00000263121 NGFRP08138 427 aa21.04■□□□□ 0.96
SMARCB1-201ENST00000263121 NRG3P56975 720 aa21.04■□□□□ 0.96
SMARCB1-201ENST00000263121 IL1RL1Q01638 556 aa21.04■□□□□ 0.96
SMARCB1-201ENST00000263121 DESI1Q6ICB0 168 aa21.04■□□□□ 0.96
SMARCB1-201ENST00000263121 APOOLQ6UXV4 268 aa21.04■□□□□ 0.96
SMARCB1-201ENST00000263121 ZNF559Q9BR84 538 aa21.04■□□□□ 0.96
SMARCB1-201ENST00000263121 GRIP2Q9C0E4 1043 aa21.04■□□□□ 0.96
SMARCB1-201ENST00000263121 RIBC2Q9H4K1 309 aa21.04■□□□□ 0.96
SMARCB1-201ENST00000263121 FARSAQ9Y285 508 aaKnown RBP21.04■□□□□ 0.96
SMARCB1-201ENST00000263121 LOC100130705A0A1B0GUX0 176 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 TRAPPC13A5PLN9 417 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 E9PQ18 207 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 SCDO00767 359 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 OR10H3O60404 316 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 NADKO95544 446 aaPredicted RBP21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 ADAP00813 363 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 UBTFL6P0CB48 400 aaPredicted RBP21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 CHN2P52757 468 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 RPS18P62269 152 aaKnown RBP21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 OR1Q1Q15612 314 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 EXT1Q16394 746 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 PGBD2Q6P3X8 592 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 C16orf47Q6ZP98 133 aaPredicted RBP21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 ZNF550Q7Z398 422 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 NLGN4XQ8N0W4 816 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 TOR1AIP2Q8NFQ8 470 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 NLGN4YQ8NFZ3 816 aaPredicted RBP21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 OR11G2Q8NGC1 345 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 SLC38A4Q969I6 547 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 ZNF556Q9HAH1 456 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 MGAT4BQ9UQ53 548 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 NPFFR2Q9Y5X5 522 aa21.03■□□□□ 0.96
SMARCB1-201ENST00000263121 A0A087WUU8 490 aa21.02■□□□□ 0.96
SMARCB1-201ENST00000263121 OR6C70A6NIJ9 312 aa21.02■□□□□ 0.96
SMARCB1-201ENST00000263121 TERTO14746 1132 aaKnown RBP21.02■□□□□ 0.96
SMARCB1-201ENST00000263121 ZNF354AO60765 605 aaPredicted RBP21.02■□□□□ 0.96
SMARCB1-201ENST00000263121 LYPD3O95274 346 aa21.02■□□□□ 0.96
SMARCB1-201ENST00000263121 CEACAM1P13688 526 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms