RNA–Protein interactions for RNA: ENST00000262829.11

RBFOX2-201, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-201ENST00000262829 FNDC9Q8TBE3 224 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 PRPF18Q99633 342 aaKnown RBP13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 RBM24Q9BX46 236 aaKnown RBP13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 POLDIP3Q9BY77 421 aaKnown RBP13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 ACTRT3Q9BYD9 372 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 SERHL2Q9H4I8 314 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 UBQLN4Q9NRR5 601 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 ATAD3AQ9NVI7 634 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 GALNT8Q9NY28 637 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 JKAMPQ9P055 326 aa13.11□□□□□ -0.31
RBFOX2-201ENST00000262829 IGLV3-32A0A0A0MS00 114 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 A0A1W2PNV4 684 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 TMEM120BA0PK00 339 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 TUBAL3A6NHL2 446 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 HCRTR2O43614 444 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 TNFSF13O75888 250 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 CPSF4O95639 269 aaKnown RBP13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 KITP10721 976 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 CAPN3P20807 821 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 CPOXP36551 454 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 RPL3P39023 403 aaKnown RBP13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 PHC1P78364 1004 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 TAGLNQ01995 201 aaKnown RBP13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 GANABQ14697 944 aaKnown RBP13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 PON3Q15166 354 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 LSM12Q3MHD2 195 aaKnown RBP13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 FBXL19-AS1Q494R0 122 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 DCST2Q5T1A1 773 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 MEIOBQ8N635 442 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 ZNF614Q8N883 585 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 ADAMTS15Q8TE58 950 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 ZNF524Q96C55 264 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 PGM2Q96G03 612 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 OR7D2Q96RA2 312 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 PIGQQ9BRB3 760 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 BHLHE41Q9C0J9 482 aaPredicted RBP13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 PIGUQ9H490 435 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 MARCOQ9UEW3 520 aaPredicted RBP13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 FAF1Q9UNN5 650 aaPredicted RBP13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 ABCA4P78363 2273 aa13.1□□□□□ -0.31
RBFOX2-201ENST00000262829 GOLGA8QA0A0J9YX86 632 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 GOLGA8OA6NCC3 632 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 GOLGA8NF8WBI6 632 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 SCDO00767 359 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 EIF1AYO14602 144 aaKnown RBP13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 AQP8O94778 261 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 SLC6A8P48029 635 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 ZNF117Q03924 483 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 POU4F3Q15319 338 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 BCL2A1Q16548 175 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 TMEM44Q2T9K0 475 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 FLYWCH1Q4VC44 716 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 CBLN3Q6UW01 205 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 BTLAQ7Z6A9 289 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 HMGN2P46Q86SG4 172 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 GGNQ86UU5 652 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 ANKK1Q8NFD2 765 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 OR56A1Q8NGH5 318 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 OR4A15Q8NGL6 344 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 PSMA8Q8TAA3 256 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 PHOSPHO1Q8TCT1 267 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 PMM1Q92871 262 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 LRRC46Q96FV0 321 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 TEX37Q96LM6 180 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 RNF145Q96MT1 663 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 UCN2Q96RP3 112 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 SFXN3Q9BWM7 321 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 DPY30Q9C005 99 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 OPN3Q9H1Y3 402 aaPredicted RBP13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 CLEC4MQ9H2X3 399 aaPredicted RBP13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 WDR55Q9H6Y2 383 aaPredicted RBP13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 DUSP22Q9NRW4 184 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 MED17Q9NVC6 651 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 CLEC4AQ9UMR7 237 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 CARD8Q9Y2G2 431 aa13.09□□□□□ -0.31
RBFOX2-201ENST00000262829 CENPVL1A0A0U1RR11 272 aa13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 A6NNC1 897 aa13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 IL18BPO95998 194 aa13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 DDX5P17844 614 aaKnown RBP13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 ATP6V1C1P21283 382 aa13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 DNAJA1P31689 397 aaKnown RBP13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 EIF1AXP47813 144 aaKnown RBP13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 MAGOHP61326 146 aaKnown RBP13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 FAM27E3Q08E93 113 aa13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 MAD2L1Q13257 205 aaPredicted RBP13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 TOMM34Q15785 309 aaPredicted RBP13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 SGCBQ16585 318 aa13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 ZCCHC12Q6PEW1 402 aa13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 C6orf120Q7Z4R8 191 aa13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 RFWD2Q8NHY2 731 aa13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 POC1BQ8TC44 478 aa13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 STARD4Q96DR4 205 aa13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 DTNBP1Q96EV8 351 aa13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 MARK4Q96L34 752 aa13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 STACQ99469 402 aa13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 ASIC5Q9NY37 505 aa13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.08□□□□□ -0.31
RBFOX2-201ENST00000262829 ITPR3Q14573 2671 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms