RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 B4GALNT2Q8NHY0 566 aa16.66■□□□□ 0.26
COPE-201ENST00000262812 SMPDL3BQ92485 455 aa16.66■□□□□ 0.26
COPE-201ENST00000262812 KLHDC3Q9BQ90 382 aa16.66■□□□□ 0.26
COPE-201ENST00000262812 PIGQQ9BRB3 760 aa16.66■□□□□ 0.26
COPE-201ENST00000262812 NCOA6Q14686 2063 aaPredicted RBP16.66■□□□□ 0.26
COPE-201ENST00000262812 A0A1W2PQD3 144 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 H3BNH8 94 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 SEC14L5O43304 696 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 OIP5O43482 229 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 HCRTR2O43614 444 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 OPN1LWP04000 364 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 IL6P05231 212 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 PEPDP12955 493 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 MSX1P28360 303 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 SUCLG1P53597 346 aaKnown RBP16.65■□□□□ 0.26
COPE-201ENST00000262812 AQP5P55064 265 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 TFF3Q07654 80 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 BCL2A1Q16548 175 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 NDUFAF6Q330K2 333 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 GLYR1Q49A26 553 aaPredicted RBP16.65■□□□□ 0.26
COPE-201ENST00000262812 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.65■□□□□ 0.26
COPE-201ENST00000262812 SAXO2Q658L1 398 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 MISPQ8IVT2 679 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 MIER2Q8N344 545 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 MEIOBQ8N635 442 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 GOT1L1Q8NHS2 421 aaPredicted RBP16.65■□□□□ 0.26
COPE-201ENST00000262812 CKAP2Q8WWK9 683 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 NEURL3Q96EH8 262 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 THOC1Q96FV9 657 aaKnown RBP16.65■□□□□ 0.26
COPE-201ENST00000262812 NPAS1Q99742 590 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 EBF4Q9BQW3 602 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 HHATLQ9HCP6 504 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 NPDC1Q9NQX5 325 aaPredicted RBP16.65■□□□□ 0.26
COPE-201ENST00000262812 EXD2Q9NVH0 621 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 MKLN1Q9UL63 735 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 CARD8Q9Y2G2 431 aa16.65■□□□□ 0.26
COPE-201ENST00000262812 MBD3L4A6NDZ8 208 aaPredicted RBP16.64■□□□□ 0.25
COPE-201ENST00000262812 MBD3L3A6NE82 208 aaPredicted RBP16.64■□□□□ 0.25
COPE-201ENST00000262812 MBD3L5A6NJ08 208 aaPredicted RBP16.64■□□□□ 0.25
COPE-201ENST00000262812 DVL2O14641 736 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 STX11O75558 287 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 ZNF41P51814 821 aaPredicted RBP16.64■□□□□ 0.25
COPE-201ENST00000262812 POLR2JP52435 117 aaKnown RBP16.64■□□□□ 0.25
COPE-201ENST00000262812 ZNF136P52737 540 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 CLDN20P56880 219 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 SLC25A35Q3KQZ1 300 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 ARHGAP11BQ3KRB8 267 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 ATAD3BQ5T9A4 648 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 RNF130Q86XS8 419 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 TRIML2Q8N7C3 387 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 CHDHQ8NE62 594 aaPredicted RBP16.64■□□□□ 0.25
COPE-201ENST00000262812 OR9I1Q8NGQ6 314 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 RFWD2Q8NHY2 731 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 MBD3L2Q8NHZ7 208 aaPredicted RBP16.64■□□□□ 0.25
COPE-201ENST00000262812 PNPT1Q8TCS8 783 aaKnown RBP16.64■□□□□ 0.25
COPE-201ENST00000262812 MIPOL1Q8TD10 442 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 SPOCK3Q9BQ16 436 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 TCF7L2Q9NQB0 619 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 SDR39U1Q9NRG7 319 aaPredicted RBP16.64■□□□□ 0.25
COPE-201ENST00000262812 MED17Q9NVC6 651 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 ZIM2Q9NZV7 527 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 DTNAQ9Y4J8 743 aa16.64■□□□□ 0.25
COPE-201ENST00000262812 FREM3P0C091 2139 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 A0A087WZY1 265 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 LINC01387J3KSC0 135 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 RFXANKO14593 260 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 POLR3GO15318 223 aaPredicted RBP16.63■□□□□ 0.25
COPE-201ENST00000262812 TGDSO95455 350 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 NUDT14O95848 222 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 AGR2O95994 175 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 AK1P00568 194 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 TMIGD3P0DMS9 266 aaPredicted RBP16.63■□□□□ 0.25
COPE-201ENST00000262812 CTSSP25774 331 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 KHKP50053 298 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 CLDN15P56746 228 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 ZNF117Q03924 483 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 FOXF2Q12947 444 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 SNTB1Q13884 538 aaKnown RBP16.63■□□□□ 0.25
COPE-201ENST00000262812 PDZK1Q5T2W1 519 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 CBLN3Q6UW01 205 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 DNAJC14Q6Y2X3 702 aaPredicted RBP16.63■□□□□ 0.25
COPE-201ENST00000262812 P4HA3Q7Z4N8 544 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 MTERF4Q7Z6M4 381 aaKnown RBP16.63■□□□□ 0.25
COPE-201ENST00000262812 GRAMD2AQ8IUY3 354 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 WNT2BQ93097 391 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 VPS33AQ96AX1 596 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 INTS12Q96CB8 462 aaKnown RBP16.63■□□□□ 0.25
COPE-201ENST00000262812 MAGEB18Q96M61 343 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 ENKD1Q9H0I2 346 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 ZNF446Q9NWS9 450 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 ZNF629Q9UEG4 869 aaPredicted RBP16.63■□□□□ 0.25
COPE-201ENST00000262812 MAST4O15021 2626 aa16.63■□□□□ 0.25
COPE-201ENST00000262812 NPIPB9F8W1W9 429 aa16.62■□□□□ 0.25
COPE-201ENST00000262812 TNFRSF21O75509 655 aa16.62■□□□□ 0.25
COPE-201ENST00000262812 CYP7B1O75881 506 aa16.62■□□□□ 0.25
COPE-201ENST00000262812 ANP32DO95626 131 aa16.62■□□□□ 0.25
COPE-201ENST00000262812 TGM6O95932 706 aa16.62■□□□□ 0.25
COPE-201ENST00000262812 EEFSECP57772 596 aaKnown RBP16.62■□□□□ 0.25
COPE-201ENST00000262812 LRRC74AQ0VAA2 488 aa16.62■□□□□ 0.25
COPE-201ENST00000262812 TMEM44Q2T9K0 475 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms