RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 CHRDQ9H2X0 955 aa13.04□□□□□ -0.32
CDH1-201ENST00000261769 FZD6O60353 706 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 RAD51DO75771 328 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 CTSLP07711 333 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 PCBD1P61457 104 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 TUBA1BP68363 451 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 TUBA4AP68366 448 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 HSD17B12Q53GQ0 312 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 GPR139Q6DWJ6 353 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 SLC48A1Q6P1K1 146 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 FAM111BQ6SJ93 734 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 C3P1Q6ZMU1 363 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 TUBA1AQ71U36 451 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 HS3ST5Q8IZT8 346 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 BAHD1Q8TBE0 780 aaPredicted RBP13.03□□□□□ -0.32
CDH1-201ENST00000261769 NEDD4LQ96PU5 975 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 DPH1Q9BZG8 443 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 TEX10Q9NXF1 929 aaPredicted RBP13.03□□□□□ -0.32
CDH1-201ENST00000261769 ZNF639Q9UID6 485 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 SLC17A4Q9Y2C5 497 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 PLEKHA6Q9Y2H5 1048 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 MKRN2OSH3BPM6 223 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 GFYI3L273 518 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 GKN3PP0CG01 181 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 NME1P15531 152 aaKnown RBP13.03□□□□□ -0.32
CDH1-201ENST00000261769 HOXB9P17482 250 aaPredicted RBP13.03□□□□□ -0.32
CDH1-201ENST00000261769 TNFSF4P23510 183 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 DPP4P27487 766 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 SPEM2Q0P670 501 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 C6orf89Q6UWU4 347 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 RNF175Q8N4F7 328 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 MSLNLQ96KJ4 702 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 LINC00615Q96LM1 132 aaPredicted RBP13.03□□□□□ -0.32
CDH1-201ENST00000261769 C3orf30Q96M34 536 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 DCSTAMPQ9H295 470 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 ZNF443Q9Y2A4 671 aaPredicted RBP13.03□□□□□ -0.32
CDH1-201ENST00000261769 CARD8Q9Y2G2 431 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 LOC102725191A0A1B0GVB3 256 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 NSA2O95478 260 aaKnown RBP13.03□□□□□ -0.32
CDH1-201ENST00000261769 MZT1Q08AG7 82 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 CCSMST1Q4G0I0 132 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 PRAMEF20Q5VT98 475 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 DTWD1Q8N5C7 304 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 MYEOVQ96EZ4 313 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 SENP5Q96HI0 755 aaPredicted RBP13.03□□□□□ -0.32
CDH1-201ENST00000261769 SAMD8Q96LT4 415 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 KLHL15Q96M94 604 aa13.03□□□□□ -0.32
CDH1-201ENST00000261769 PIAS2O75928 621 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 PTHP01270 115 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 RLN2P04090 185 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 LCATP04180 440 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 PTGER1P34995 402 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 HERV-K104P61576 105 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 ZBED5Q49AG3 693 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 KCTD21Q4G0X4 260 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 PIGGQ5H8A4 983 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 ZNF773Q6PK81 442 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 MS4A15Q8N5U1 240 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 SLC2A12Q8TD20 617 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 FBXL20Q96IG2 436 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 POLHQ9Y253 713 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 A0A0X1KG70 313 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 H3BSH0 61 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 ARAFP10398 606 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 EIF2B2P49770 351 aaKnown RBP13.02□□□□□ -0.32
CDH1-201ENST00000261769 MICAQ29983 383 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 OR5M10Q6IEU7 315 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 ZNF367Q7RTV3 350 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 KIAA0907Q7Z7F0 614 aaPredicted RBP13.02□□□□□ -0.32
CDH1-201ENST00000261769 DUSP19Q8WTR2 217 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 BPIFA2Q96DR5 249 aa13.02□□□□□ -0.32
CDH1-201ENST00000261769 TRBV2A0A0J9YWF9 115 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 FRS3O43559 492 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 PPP1R3DO95685 299 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 CISD3P0C7P0 127 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 MSX1P28360 303 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 FOXC1Q12948 553 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 ZNF423Q2M1K9 1284 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 TMEM176BQ3YBM2 270 aaPredicted RBP13.02□□□□□ -0.33
CDH1-201ENST00000261769 C18orf63Q68DL7 685 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 CYP4V2Q6ZWL3 525 aaPredicted RBP13.02□□□□□ -0.33
CDH1-201ENST00000261769 TRUB1Q8WWH5 349 aaKnown RBP13.02□□□□□ -0.33
CDH1-201ENST00000261769 THOC3Q96J01 351 aaKnown RBP13.02□□□□□ -0.33
CDH1-201ENST00000261769 MUS81Q96NY9 551 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 PIGQQ9BRB3 760 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 HCAR1Q9BXC0 346 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 TMEM121BQ9BXQ6 578 aaPredicted RBP13.02□□□□□ -0.33
CDH1-201ENST00000261769 FOLH1BQ9HBA9 442 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 SNX11Q9Y5W9 270 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 TRIOBPQ9H2D6 2365 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 SH3D21A4FU49 640 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 IDSB3KWA1 339 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 FURINP09958 794 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 MTNR1AP48039 350 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 PRKXP51817 358 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 TRA2AQ13595 282 aaKnown RBP eCLIP13.02□□□□□ -0.33
CDH1-201ENST00000261769 BCL2L15Q5TBC7 163 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 CWF19L1Q69YN2 538 aaKnown RBP13.02□□□□□ -0.33
CDH1-201ENST00000261769 PLBD1Q6P4A8 553 aa13.02□□□□□ -0.33
CDH1-201ENST00000261769 LRRN1Q6UXK5 716 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms