RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 ACOT11Q8WXI4 607 aaPredicted RBP20.63■□□□□ 0.89
SIX3-201ENST00000260653 AKIRIN1Q9H9L7 192 aaPredicted RBP20.63■□□□□ 0.89
SIX3-201ENST00000260653 C11orf16Q9NQ32 467 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 C14orf105Q9NVL8 296 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 CNIH4Q9P003 139 aa20.63■□□□□ 0.89
SIX3-201ENST00000260653 TESQ9UGI8 421 aaKnown RBP20.63■□□□□ 0.89
SIX3-201ENST00000260653 SMIM31A0A1B0GVY4 71 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 CNOT3O75175 753 aaKnown RBP20.62■□□□□ 0.89
SIX3-201ENST00000260653 ILKQ13418 452 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 FGFBP1Q14512 234 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 BROXQ5VW32 411 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 KCTD8Q6ZWB6 473 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 OVCH1Q7RTY7 1134 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 CCDC103Q8IW40 242 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 ART5Q96L15 291 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 PHOX2BQ99453 314 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 ZNF226Q9NYT6 803 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 FLRT3Q9NZU0 649 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 COPS7AQ9UBW8 275 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 TRAPPC13A5PLN9 417 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 HEXBP07686 556 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 ZNF28P17035 718 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 CD300LDQ6UXZ3 194 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 OR1N1Q8NGS0 311 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 PMEPA1Q969W9 287 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 FAM46AQ96IP4 442 aaKnown RBP20.62■□□□□ 0.89
SIX3-201ENST00000260653 LCORQ96JN0 433 aaPredicted RBP20.62■□□□□ 0.89
SIX3-201ENST00000260653 RXFP3Q9NSD7 469 aa20.62■□□□□ 0.89
SIX3-201ENST00000260653 ZNF318Q5VUA4 2279 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 C2orf92A0A1B0GVN3 265 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 CDC14CA4D256 554 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 FRG2CA6NGY1 282 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 RBM44Q6ZP01 1051 aaKnown RBP20.61■□□□□ 0.89
SIX3-201ENST00000260653 RRM2BQ7LG56 351 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 GRAMD2AQ8IUY3 354 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 RHOXF1Q8NHV9 184 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 PRSS27Q9BQR3 290 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.61■□□□□ 0.89
SIX3-201ENST00000260653 IMPAD1Q9NX62 359 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 MEN1O00255 615 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 CDX4O14627 284 aaPredicted RBP20.61■□□□□ 0.89
SIX3-201ENST00000260653 GALR2O43603 387 aaPredicted RBP20.61■□□□□ 0.89
SIX3-201ENST00000260653 PIP5K1CO60331 668 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 FMO6PO60774 539 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 PSMD4P55036 377 aaKnown RBP20.61■□□□□ 0.89
SIX3-201ENST00000260653 CXCR4P61073 352 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 NEDD8Q15843 81 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 NDUFAF6Q330K2 333 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 WDR88Q6ZMY6 472 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 BPHLQ86WA6 291 aaPredicted RBP20.61■□□□□ 0.89
SIX3-201ENST00000260653 NRMQ8IXM6 262 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 PRR22Q8IZ63 422 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 RBM38Q9H0Z9 239 aaKnown RBP20.61■□□□□ 0.89
SIX3-201ENST00000260653 POLR1BQ9H9Y6 1135 aa20.61■□□□□ 0.89
SIX3-201ENST00000260653 COL27A1Q8IZC6 1860 aaPredicted RBP20.61■□□□□ 0.89
SIX3-201ENST00000260653 ABCB7O75027 752 aa20.6■□□□□ 0.89
SIX3-201ENST00000260653 CPNE3O75131 537 aaKnown RBP20.6■□□□□ 0.89
SIX3-201ENST00000260653 OMPP47874 163 aa20.6■□□□□ 0.89
SIX3-201ENST00000260653 CDC42P60953 191 aa20.6■□□□□ 0.89
SIX3-201ENST00000260653 COX10Q12887 443 aa20.6■□□□□ 0.89
SIX3-201ENST00000260653 ANKRD37Q7Z713 158 aa20.6■□□□□ 0.89
SIX3-201ENST00000260653 DEPDC4Q8N2C3 294 aa20.6■□□□□ 0.89
SIX3-201ENST00000260653 PIGXQ8TBF5 258 aa20.6■□□□□ 0.89
SIX3-201ENST00000260653 POLR2J2Q9GZM3 115 aaKnown RBP20.6■□□□□ 0.89
SIX3-201ENST00000260653 HEATR5AQ86XA9 2040 aa20.6■□□□□ 0.89
SIX3-201ENST00000260653 LYPD3O95274 346 aa20.6■□□□□ 0.89
SIX3-201ENST00000260653 ONECUT2O95948 504 aa20.6■□□□□ 0.89
SIX3-201ENST00000260653 GABRB1P18505 474 aa20.6■□□□□ 0.89
SIX3-201ENST00000260653 ACAA2P42765 397 aaKnown RBP20.6■□□□□ 0.89
SIX3-201ENST00000260653 CCDC157Q569K6 752 aa20.6■□□□□ 0.89
SIX3-201ENST00000260653 P3H2Q8IVL5 708 aa20.6■□□□□ 0.89
SIX3-201ENST00000260653 WWTR1Q9GZV5 400 aa20.6■□□□□ 0.89
SIX3-201ENST00000260653 VSTM2BA6NLU5 285 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 FAM20BO75063 409 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 ALOX12BO75342 701 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 IL33O95760 270 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 IFNGR2P38484 337 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 SPARTQ8N0X7 666 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 SPSB2Q99619 263 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 NDUFA13Q9P0J0 144 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 SERINC4A6NH21 518 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 CD59P13987 128 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 GPR143P51810 404 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 SLC35A2P78381 396 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 PMS2P3Q13401 168 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 HLA-DQA1Q5Y7H0 255 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 DESI1Q6ICB0 168 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 MBOAT2Q6ZWT7 520 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 KIF18BQ86Y91 864 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 IQCF1Q8N6M8 205 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 GNPDA2Q8TDQ7 276 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 GRHL3Q8TE85 626 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 ZNF559Q9BR84 538 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 DSN1Q9H410 356 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 SCN3BQ9NY72 215 aa20.59■□□□□ 0.89
SIX3-201ENST00000260653 CSTAP01040 98 aa20.58■□□□□ 0.89
SIX3-201ENST00000260653 GPR4P46093 362 aa20.58■□□□□ 0.89
SIX3-201ENST00000260653 NR0B1P51843 470 aaKnown RBP20.58■□□□□ 0.89
SIX3-201ENST00000260653 ALDH6A1Q02252 535 aaKnown RBP20.58■□□□□ 0.89
SIX3-201ENST00000260653 SLX4IPQ5VYV7 408 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms