RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 LHPPQ9H008 270 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 SFTPBP07988 381 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 PPP5CP53041 499 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 CXCR4P61073 352 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 GPR139Q6DWJ6 353 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 CGB2Q6NT52 195 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 ANKRD33Q7Z3H0 272 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 EBF1Q9UH73 591 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 SLC6A14Q9UN76 642 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 IDUAP35475 653 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 BCL7AQ4VC05 210 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 ARSJQ5FYB0 599 aaPredicted RBP17.81■□□□□ 0.44
PTPRE-201ENST00000254667 C19orf47Q8N9M1 422 aaKnown RBP17.81■□□□□ 0.44
PTPRE-201ENST00000254667 OR5W2Q8NH69 310 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 MLXQ9UH92 298 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 KCNK5O95279 499 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 BPNT1O95861 308 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 PLATP00750 562 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 TMEM225BP0DP42 221 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 UGT2B7P16662 529 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 EIF2DP41214 584 aaKnown RBP17.81■□□□□ 0.44
PTPRE-201ENST00000254667 TNFRSF17Q02223 184 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 SLC6A19Q695T7 634 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 DNTTIP1Q9H147 329 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 VDAC3Q9Y277 283 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 GALR3O60755 368 aaPredicted RBP17.8■□□□□ 0.44
PTPRE-201ENST00000254667 SYNPOQ8N3V7 929 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 ADAMTS19Q8TE59 1207 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 TCEAL3Q969E4 200 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 ZMYND19Q96E35 227 aaPredicted RBP17.8■□□□□ 0.44
PTPRE-201ENST00000254667 ZNF597Q96LX8 424 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 SLC22A12Q96S37 553 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 ADOQ96SZ5 270 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 SLC39A1Q9NY26 324 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 ZNF175Q9Y473 711 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 COL16A1Q07092 1604 aaPredicted RBP17.8■□□□□ 0.44
PTPRE-201ENST00000254667 ZNF701M0R085 212 aaPredicted RBP17.8■□□□□ 0.44
PTPRE-201ENST00000254667 FRS3O43559 492 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 AIFM1O95831 613 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 EXOSC7Q15024 291 aaKnown RBP17.8■□□□□ 0.44
PTPRE-201ENST00000254667 INTS14Q96SY0 518 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 AGTR1P30556 359 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 ZNF81P51508 661 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 NCS1P62166 190 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 AGBL5Q8NDL9 886 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 SLC25A44Q96H78 314 aaPredicted RBP17.8■□□□□ 0.44
PTPRE-201ENST00000254667 MAP3K3Q99759 626 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 ICAM2P13598 275 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 ARG2P78540 354 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 CYB561A3Q8NBI2 242 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 OR9A4Q8NGU2 314 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 SLC29A1Q99808 456 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 SAP130Q9H0E3 1048 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 ZNF160Q9HCG1 818 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 CSNK1G3Q9Y6M4 447 aa17.8■□□□□ 0.44
PTPRE-201ENST00000254667 GABRB3P28472 473 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 SGSHP51688 502 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 OR5J2Q8NH18 312 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 TFAP2CQ92754 450 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 EGLN2Q96KS0 407 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 SYT3Q9BQG1 590 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 R3HDMLQ9H3Y0 253 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 NSG1A0A0A6YYJ2 146 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 AGAP5A6NIR3 686 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 LCATP04180 440 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 VASPP50552 380 aaPredicted RBP17.79■□□□□ 0.44
PTPRE-201ENST00000254667 HBA1P69905 142 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 REEP5Q00765 189 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 ATXN7L3Q14CW9 347 aaPredicted RBP17.79■□□□□ 0.44
PTPRE-201ENST00000254667 OR7A5Q15622 319 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 CDKN3Q16667 212 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 TMEM53Q6P2H8 277 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 GALNT11Q8NCW6 608 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 USP36Q9P275 1121 aaKnown RBP17.79■□□□□ 0.44
PTPRE-201ENST00000254667 GABBR2O75899 941 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 ALDOCP09972 364 aaKnown RBP17.79■□□□□ 0.44
PTPRE-201ENST00000254667 AIMP2Q13155 320 aaKnown RBP17.79■□□□□ 0.44
PTPRE-201ENST00000254667 SLC5A12Q1EHB4 618 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 TMEM201Q5SNT2 666 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 SLCO4C1Q6ZQN7 724 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 TRIM43Q96BQ3 446 aaPredicted RBP17.79■□□□□ 0.44
PTPRE-201ENST00000254667 ZNF587Q96SQ5 575 aaPredicted RBP17.79■□□□□ 0.44
PTPRE-201ENST00000254667 CACNG6Q9BXT2 260 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 ZNF576Q9H609 170 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 RAB9BQ9NP90 201 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 NPIPA5A0A0B4J1W7 369 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 TRBV11-1A0A0K0K1C0 115 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 NPIPA7E9PJI5 369 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 IFNA5P01569 189 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 NPIPA8P0DM63 369 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 EN2P19622 333 aaPredicted RBP17.79■□□□□ 0.44
PTPRE-201ENST00000254667 MAOBP27338 520 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 CSNK1A1P48729 337 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 KCNJ10P78508 379 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 MLF2Q15773 248 aaPredicted RBP17.79■□□□□ 0.44
PTPRE-201ENST00000254667 ENTPD8Q5MY95 495 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 TRIM46Q7Z4K8 759 aa17.79■□□□□ 0.44
PTPRE-201ENST00000254667 CHDHQ8NE62 594 aaPredicted RBP17.79■□□□□ 0.44
PTPRE-201ENST00000254667 OR51L1Q8NGJ5 315 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms