RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 MCTS1Q9ULC4 181 aaKnown RBP18.9■□□□□ 0.62
NEDD8-201ENST00000250495 ARID1AO14497 2285 aa18.9■□□□□ 0.62
NEDD8-201ENST00000250495 NIPBLQ6KC79 2804 aaeCLIP18.89■□□□□ 0.61
NEDD8-201ENST00000250495 TLDC2A0PJX2 215 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 C7orf72A4D263 438 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 SIAH2O43255 324 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 SMPD2O60906 423 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 SYNGR4O95473 234 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 BCKDHAP12694 445 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 IL11P20809 199 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 MAPK1P28482 360 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 CTBP2P56545 445 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 ACKR1Q16570 336 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 PDSS1Q5T2R2 415 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 ZNF550Q7Z398 422 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 GATSQ8NAP1 163 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 OR6K3Q8NGY3 331 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 OR10D3Q8NH80 312 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 FBXO30Q8TB52 745 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 TWIST2Q8WVJ9 160 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 ZC3HAV1LQ96H79 300 aaKnown RBP18.89■□□□□ 0.61
NEDD8-201ENST00000250495 BTBD2Q9BX70 525 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 GLRX2Q9NS18 164 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 MKS1Q9NXB0 559 aa18.89■□□□□ 0.61
NEDD8-201ENST00000250495 VPS13CQ709C8 3753 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 A0A1W2PQD3 144 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 A0A1W2PRB8 838 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 ADAMDEC1O15204 470 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 PPP3CBP16298 524 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 ME2P23368 584 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 ADSLP30566 484 aaPredicted RBP18.88■□□□□ 0.61
NEDD8-201ENST00000250495 ALDH3A1P30838 453 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 CCKARP32238 428 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 HPCAL1P37235 193 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 POU6F2P78424 691 aaPredicted RBP18.88■□□□□ 0.61
NEDD8-201ENST00000250495 EXOC3L2Q2M3D2 409 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 UGT3A2Q3SY77 523 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 ARL13AQ5H913 290 aaPredicted RBP18.88■□□□□ 0.61
NEDD8-201ENST00000250495 GTF2IRD2BQ6EKJ0 949 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 ESPNLQ6ZVH7 1005 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 GTF2IRD2Q86UP8 949 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 KRTAP1-3Q8IUG1 177 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 JADE3Q92613 823 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 FAM120BQ96EK7 910 aaKnown RBP18.88■□□□□ 0.61
NEDD8-201ENST00000250495 APOPT1Q96IL0 206 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 ADGRG7Q96K78 797 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 PPP3R2Q96LZ3 170 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 STACQ99469 402 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 DUSP22Q9NRW4 184 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 ZCCHC3Q9NUD5 404 aaKnown RBP18.88■□□□□ 0.61
NEDD8-201ENST00000250495 MED17Q9NVC6 651 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 FBXO34Q9NWN3 711 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 GIN1Q9NXP7 522 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 ATP6V1HQ9UI12 483 aa18.88■□□□□ 0.61
NEDD8-201ENST00000250495 CXCL13O43927 109 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 SS18L1O75177 396 aaPredicted RBP18.87■□□□□ 0.61
NEDD8-201ENST00000250495 SOX30O94993 753 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 HMGN2P05204 90 aaKnown RBP18.87■□□□□ 0.61
NEDD8-201ENST00000250495 CHRNGP07510 517 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 INHBBP09529 407 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 PSMA4P25789 261 aaKnown RBP18.87■□□□□ 0.61
NEDD8-201ENST00000250495 SLC6A8P48029 635 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 PLPPR5Q32ZL2 321 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 EXOSC6Q5RKV6 272 aaKnown RBP18.87■□□□□ 0.61
NEDD8-201ENST00000250495 ANKRD34AQ69YU3 496 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 C20orf204Q6ZNR8 217 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 ZAR1Q86SH2 424 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 RIBC1Q8N443 379 aaPredicted RBP18.87■□□□□ 0.61
NEDD8-201ENST00000250495 NATD1Q8N6N6 113 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 BANPQ8N9N5 519 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 OR2V1Q8NHB1 315 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 B4GALNT2Q8NHY0 566 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 CHMP6Q96FZ7 201 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 SH3YL1Q96HL8 342 aaPredicted RBP18.87■□□□□ 0.61
NEDD8-201ENST00000250495 RNF145Q96MT1 663 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 HOXD1Q9GZZ0 328 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 PIGUQ9H490 435 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 UBTD1Q9HAC8 227 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 ZNF446Q9NWS9 450 aa18.87■□□□□ 0.61
NEDD8-201ENST00000250495 PIP5K1BO14986 540 aa18.86■□□□□ 0.61
NEDD8-201ENST00000250495 SCAMP2O15127 329 aaKnown RBP18.86■□□□□ 0.61
NEDD8-201ENST00000250495 OPN1LWP04000 364 aa18.86■□□□□ 0.61
NEDD8-201ENST00000250495 EFNA1P20827 205 aaPredicted RBP18.86■□□□□ 0.61
NEDD8-201ENST00000250495 ATP6V1C1P21283 382 aa18.86■□□□□ 0.61
NEDD8-201ENST00000250495 EIF1P41567 113 aaKnown RBP18.86■□□□□ 0.61
NEDD8-201ENST00000250495 LASP1Q14847 261 aaKnown RBP18.86■□□□□ 0.61
NEDD8-201ENST00000250495 CTU2Q2VPK5 515 aaKnown RBP18.86■□□□□ 0.61
NEDD8-201ENST00000250495 CCNJQ5T5M9 372 aa18.86■□□□□ 0.61
NEDD8-201ENST00000250495 STK32CQ86UX6 486 aa18.86■□□□□ 0.61
NEDD8-201ENST00000250495 TRABD2AQ86V40 505 aa18.86■□□□□ 0.61
NEDD8-201ENST00000250495 MARK4Q96L34 752 aa18.86■□□□□ 0.61
NEDD8-201ENST00000250495 CCL19Q99731 98 aa18.86■□□□□ 0.61
NEDD8-201ENST00000250495 SIRT3Q9NTG7 399 aaPredicted RBP18.86■□□□□ 0.61
NEDD8-201ENST00000250495 ATAD3AQ9NVI7 634 aa18.86■□□□□ 0.61
NEDD8-201ENST00000250495 CLEC4AQ9UMR7 237 aa18.86■□□□□ 0.61
NEDD8-201ENST00000250495 SNX8Q9Y5X2 465 aa18.86■□□□□ 0.61
NEDD8-201ENST00000250495 DSCAMO60469 2012 aa18.86■□□□□ 0.61
NEDD8-201ENST00000250495 NUP214P35658 2090 aaPredicted RBP18.85■□□□□ 0.61
NEDD8-201ENST00000250495 A0A0J9YW62 118 aa18.85■□□□□ 0.61
NEDD8-201ENST00000250495 TMEM233B4DJY2 109 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms