RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 JSRP1Q96MG2 331 aaPredicted RBP12.83□□□□□ -0.36
NCLN-201ENST00000246117 ASIC5Q9NY37 505 aa12.83□□□□□ -0.36
NCLN-201ENST00000246117 A0A0B4J203 849 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 ACOD1A6NK06 481 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 GABRPO00591 440 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 F8A1P23610 371 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 GPNMBQ14956 572 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 RASSF6Q6ZTQ3 369 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 ALDH16A1Q8IZ83 802 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 POLDIP3Q9BY77 421 aaKnown RBP12.82□□□□□ -0.36
NCLN-201ENST00000246117 SEC61A2Q9H9S3 476 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 GALNT9Q9HCQ5 603 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 KCNE1BA0A087WTH5 132 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 NTSR1P30989 418 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 SLC1A3P43003 542 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 CRMP1Q14194 572 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 OLFML2AQ68BL7 652 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 TMC8Q8IU68 726 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 REM2Q8IYK8 340 aaPredicted RBP12.82□□□□□ -0.36
NCLN-201ENST00000246117 OR2L3Q8NG85 312 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 GPER1Q99527 375 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 MKRN2Q9H000 416 aaKnown RBP12.82□□□□□ -0.36
NCLN-201ENST00000246117 C6orf106Q9H6K1 298 aaPredicted RBP12.82□□□□□ -0.36
NCLN-201ENST00000246117 MTHFD2LQ9H903 347 aaPredicted RBP12.82□□□□□ -0.36
NCLN-201ENST00000246117 TAS2R10Q9NYW0 307 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 TBC1D24Q9ULP9 559 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 GPR34Q9UPC5 381 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 TRAPPC13A5PLN9 417 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 SOX1O00570 391 aaPredicted RBP12.82□□□□□ -0.36
NCLN-201ENST00000246117 GATBO75879 557 aaKnown RBP12.82□□□□□ -0.36
NCLN-201ENST00000246117 F13BP05160 661 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 HNRNPA1P09651 372 aaKnown RBP eCLIP12.82□□□□□ -0.36
NCLN-201ENST00000246117 LIPCP11150 499 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 ILKQ13418 452 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 RPE65Q16518 533 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 FOXRED2Q8IWF2 684 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 VWA5B2Q8N398 1253 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 OR13C5Q8NGS8 318 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 ACOT11Q8WXI4 607 aaPredicted RBP12.82□□□□□ -0.36
NCLN-201ENST00000246117 TM9SF4Q92544 642 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 SNAPC3Q92966 411 aa12.82□□□□□ -0.36
NCLN-201ENST00000246117 CPED1A4D0V7 1026 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 CLEC3AO75596 197 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 PCMT1P22061 227 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 CXCR1P25024 350 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 SLC6A6P31641 620 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 MAGEA8P43361 318 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 TSPAN5P62079 268 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 SELENBP1Q13228 472 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 ZNF77Q15935 545 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 TMEM35AQ53FP2 167 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 HSD17B12Q53GQ0 312 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 FAM205BPQ63HN1 556 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 FAHD1Q6P587 224 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 MOSPD2Q8NHP6 518 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 PFN4Q8NHR9 129 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 TNFRSF13CQ96RJ3 184 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 LMF1Q96S06 567 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 SAGE1Q9NXZ1 904 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 CNOT2Q9NZN8 540 aaKnown RBP12.81□□□□□ -0.36
NCLN-201ENST00000246117 TBC1D29Q9UFV1 150 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 LRIT2A6NDA9 550 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 SPARCP09486 303 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 CHRNB1P11230 501 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 JUNDP17535 347 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 STOMP27105 288 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 GIFP27352 417 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 MLLT3P42568 568 aaPredicted RBP12.81□□□□□ -0.36
NCLN-201ENST00000246117 SRP9P49458 86 aaKnown RBP12.81□□□□□ -0.36
NCLN-201ENST00000246117 ACSM3Q53FZ2 586 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 ZNF547Q8IVP9 402 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 OR5W2Q8NH69 310 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 LRRC20Q8TCA0 184 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 APH1BQ8WW43 257 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 DEDD2Q8WXF8 326 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 GCDHQ92947 438 aaPredicted RBP12.81□□□□□ -0.36
NCLN-201ENST00000246117 OPALINQ96PE5 141 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 MICU1Q9BPX6 476 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 ZNF639Q9UID6 485 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 MT-ND4P03905 459 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 SCG5P05408 212 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 C5AR1P21730 350 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 NDUFS1P28331 727 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 SRSF5Q13243 272 aaKnown RBP12.81□□□□□ -0.36
NCLN-201ENST00000246117 PGGHGQ32M88 737 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 TMEM163Q8TC26 289 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 RIT1Q92963 219 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 FKBP10Q96AY3 582 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 CNRIP1Q96F85 164 aaPredicted RBP12.81□□□□□ -0.36
NCLN-201ENST00000246117 PRTFDC1Q9NRG1 225 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 ERVK-19Q9WJR5 959 aa12.81□□□□□ -0.36
NCLN-201ENST00000246117 PARP14Q460N5 1801 aa12.8□□□□□ -0.36
NCLN-201ENST00000246117 ARL6IP5O75915 188 aa12.8□□□□□ -0.36
NCLN-201ENST00000246117 ADH1BP00325 375 aa12.8□□□□□ -0.36
NCLN-201ENST00000246117 TNFP01375 233 aa12.8□□□□□ -0.36
NCLN-201ENST00000246117 CLUP10909 449 aa12.8□□□□□ -0.36
NCLN-201ENST00000246117 DNASE1L1P49184 302 aa12.8□□□□□ -0.36
NCLN-201ENST00000246117 MAZP56270 477 aaKnown RBP12.8□□□□□ -0.36
NCLN-201ENST00000246117 Q6ZSR6 202 aa12.8□□□□□ -0.36
NCLN-201ENST00000246117 GPR32P1Q8NGA4 272 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms