RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 MED17Q9NVC6 651 aa20.38■□□□□ 0.85
RNF39-201ENST00000244360 MEIOCA2RUB1 952 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 CENPXA8MT69 81 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 LDB3O75112 727 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 FGF9P31371 208 aaPredicted RBP20.37■□□□□ 0.85
RNF39-201ENST00000244360 MTNR1AP48039 350 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 MGAT2Q10469 447 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 DCST2Q5T1A1 773 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 CCNJQ5T5M9 372 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 SFTPA2Q8IWL1 248 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 SHISA5Q8N114 240 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 CA13Q8N1Q1 262 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 CSNK1A1LQ8N752 337 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 COQ7Q99807 217 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 ADAP2Q9NPF8 381 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 GPR52Q9Y2T5 361 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 SF3B6Q9Y3B4 125 aaKnown RBP20.37■□□□□ 0.85
RNF39-201ENST00000244360 CCDC182A6NF36 153 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 SURF4O15260 269 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 STX11O75558 287 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 DBIP07108 87 aaKnown RBP20.37■□□□□ 0.85
RNF39-201ENST00000244360 SHC2P98077 582 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 MAPK14Q16539 360 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 PRICKLE4Q2TBC4 344 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 AADACL4Q5VUY2 407 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 KIAA0895LQ68EN5 471 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 SLC44A3Q8N4M1 653 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 OR5T3Q8NGG3 340 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 TP53INP1Q96A56 240 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 ST6GAL2Q96JF0 529 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 NLGN3Q9NZ94 848 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 MAT2BQ9NZL9 334 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 CDH10Q9Y6N8 788 aa20.37■□□□□ 0.85
RNF39-201ENST00000244360 PIP5K1CO60331 668 aa20.36■□□□□ 0.85
RNF39-201ENST00000244360 TMCC2O75069 709 aa20.36■□□□□ 0.85
RNF39-201ENST00000244360 CELA2BP08218 269 aaPredicted RBP20.36■□□□□ 0.85
RNF39-201ENST00000244360 GAAP10253 952 aa20.36■□□□□ 0.85
RNF39-201ENST00000244360 TCEA1P23193 301 aaKnown RBP20.36■□□□□ 0.85
RNF39-201ENST00000244360 SDC2P34741 201 aa20.36■□□□□ 0.85
RNF39-201ENST00000244360 GPR4P46093 362 aa20.36■□□□□ 0.85
RNF39-201ENST00000244360 PGGHGQ32M88 737 aa20.36■□□□□ 0.85
RNF39-201ENST00000244360 CLEC12AQ5QGZ9 265 aa20.36■□□□□ 0.85
RNF39-201ENST00000244360 RANBP3LQ86VV4 465 aaPredicted RBP20.36■□□□□ 0.85
RNF39-201ENST00000244360 VWA5B2Q8N398 1253 aa20.36■□□□□ 0.85
RNF39-201ENST00000244360 Q8N9G6 341 aaPredicted RBP20.36■□□□□ 0.85
RNF39-201ENST00000244360 C1GALT1C1Q96EU7 318 aa20.36■□□□□ 0.85
RNF39-201ENST00000244360 PRSS27Q9BQR3 290 aa20.36■□□□□ 0.85
RNF39-201ENST00000244360 TEX12Q9BXU0 123 aa20.36■□□□□ 0.85
RNF39-201ENST00000244360 SLC7A7Q9UM01 511 aa20.36■□□□□ 0.85
RNF39-201ENST00000244360 CARD8Q9Y2G2 431 aa20.36■□□□□ 0.85
RNF39-201ENST00000244360 SPTY2D1-AS1A0A0U1RR47 76 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 POLR1CO15160 346 aaPredicted RBP20.35■□□□□ 0.85
RNF39-201ENST00000244360 AK1P00568 194 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 CSF3P09919 207 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 NID1P14543 1247 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 PPP3R1P63098 170 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 GPR68Q15743 365 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 RDH10Q8IZV5 341 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 PMM1Q92871 262 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 RFKQ969G6 155 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 CTHRC1Q96CG8 243 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 NT5EP21589 574 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 TGM4P49221 684 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 RPS25P62851 125 aaKnown RBP20.35■□□□□ 0.85
RNF39-201ENST00000244360 CRTC2Q53ET0 693 aaPredicted RBP20.35■□□□□ 0.85
RNF39-201ENST00000244360 SLC35F1Q5T1Q4 408 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 SLC30A6Q6NXT4 461 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 CD200R1LQ6Q8B3 271 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 HOXB13Q92826 284 aaPredicted RBP20.35■□□□□ 0.85
RNF39-201ENST00000244360 TMEM203Q969S6 136 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 ARHGAP9Q9BRR9 750 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 KRCC1Q9NPI7 259 aaPredicted RBP20.35■□□□□ 0.85
RNF39-201ENST00000244360 KCNE5Q9UJ90 142 aa20.35■□□□□ 0.85
RNF39-201ENST00000244360 TRDV1A0A1B0GX56 115 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 TRAPPC13A5PLN9 417 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 OR5K3A6NET4 321 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 LYPD3O95274 346 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 HTR2AP28223 471 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 PPP1CAP62136 330 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 MRPS15P82914 257 aaKnown RBP20.34■□□□□ 0.85
RNF39-201ENST00000244360 FZD2Q14332 565 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 COL19A1Q14993 1142 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 TAB1Q15750 504 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 GALNT12Q8IXK2 581 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 ARHGEF39Q8N4T4 335 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 COX18Q8N8Q8 333 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 ZNF485Q8NCK3 441 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 TM9SF4Q92544 642 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 KATNB1Q9BVA0 655 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 ZNF223Q9UK11 482 aaPredicted RBP20.34■□□□□ 0.85
RNF39-201ENST00000244360 C2CD4DB7Z1M9 353 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 HCN1O60741 890 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 FMO6PO60774 539 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 CLEC2LP0C7M8 214 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 LIMS3P0CW19 117 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 LIMS4P0CW20 117 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 GLULP15104 373 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 PTBP1P26599 531 aaKnown RBP eCLIP20.34■□□□□ 0.85
RNF39-201ENST00000244360 RAB38P57729 211 aa20.34■□□□□ 0.85
RNF39-201ENST00000244360 TBRG1Q3YBR2 411 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms