RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 SLC22A23A1A5C7 686 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 ADH5P11766 374 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 ADARB1P78563 741 aaKnown RBP13.09□□□□□ -0.31
TARDBP-201ENST00000240185 OR4D1Q15615 310 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 ZNF551Q7Z340 670 aaPredicted RBP13.09□□□□□ -0.31
TARDBP-201ENST00000240185 TRAPPC6BQ86SZ2 158 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 ARNTL2Q8WYA1 636 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 OR1E3Q8WZA6 343 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 SCAMP4Q969E2 229 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 HEMK1Q9Y5R4 338 aaPredicted RBP13.09□□□□□ -0.31
TARDBP-201ENST00000240185 TMEM88BA6NKF7 163 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 M0R3H8 397 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 GKP32189 559 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 PLA2G7Q13093 441 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 OR52W1Q6IF63 320 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 CYS1Q717R9 158 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 FAM58AQ8N1B3 248 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 BPIFB2Q8N4F0 458 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 PXT1Q8NFP0 134 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 HAVCR2Q8TDQ0 301 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 GCDHQ92947 438 aaPredicted RBP13.09□□□□□ -0.31
TARDBP-201ENST00000240185 ZNF300Q96RE9 604 aaPredicted RBP13.09□□□□□ -0.31
TARDBP-201ENST00000240185 MAF1Q9H063 256 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 NPAP1Q9NZP6 1156 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 RIMS3Q9UJD0 308 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 CBY3A6NI87 242 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 SURF4O15260 269 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 PNPP00491 289 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 DDCP20711 480 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 GABRB3P28472 473 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 CXCR4P61073 352 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 CTU1Q7Z7A3 348 aaKnown RBP13.09□□□□□ -0.31
TARDBP-201ENST00000240185 OR6F1Q8NGZ6 308 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 MTHFD2LQ9H903 347 aaPredicted RBP13.09□□□□□ -0.31
TARDBP-201ENST00000240185 HIF1ANQ9NWT6 349 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 STYXL1Q9Y6J8 313 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 VSTM2BA6NLU5 285 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 I6L893 689 aaPredicted RBP13.09□□□□□ -0.31
TARDBP-201ENST00000240185 CYTIPO60759 359 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 TP53P04637 393 aaPredicted RBP13.09□□□□□ -0.31
TARDBP-201ENST00000240185 RAB3AP20336 220 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 NME2P22392 152 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 PSMB10P40306 273 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 HTR6P50406 440 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 CCINQ13939 588 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 TBCEQ15813 527 aaPredicted RBP13.09□□□□□ -0.31
TARDBP-201ENST00000240185 FAM199XQ6PEV8 388 aaPredicted RBP13.09□□□□□ -0.31
TARDBP-201ENST00000240185 RNF111Q6ZNA4 994 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 GAREM2Q75VX8 874 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 OR4K15Q8NH41 348 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 FAM213BQ8TBF2 198 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 THAP3Q8WTV1 239 aaPredicted RBP13.09□□□□□ -0.31
TARDBP-201ENST00000240185 TXNDC15Q96J42 360 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 MRGPRX2Q96LB1 330 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 DEFB118Q96PH6 123 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 INPP5KQ9BT40 448 aa13.09□□□□□ -0.31
TARDBP-201ENST00000240185 SDR39U1Q9NRG7 319 aaPredicted RBP13.09□□□□□ -0.31
TARDBP-201ENST00000240185 CNOT2Q9NZN8 540 aaKnown RBP13.09□□□□□ -0.31
TARDBP-201ENST00000240185 A0A0D9SEW6 157 aa13.08□□□□□ -0.31
TARDBP-201ENST00000240185 CLDN24A6NM45 220 aa13.08□□□□□ -0.31
TARDBP-201ENST00000240185 KITLGP21583 273 aa13.08□□□□□ -0.31
TARDBP-201ENST00000240185 DLX2Q07687 328 aaPredicted RBP13.08□□□□□ -0.31
TARDBP-201ENST00000240185 KIAA0141Q14154 515 aaPredicted RBP13.08□□□□□ -0.31
TARDBP-201ENST00000240185 SLC9A3R2Q15599 337 aa13.08□□□□□ -0.31
TARDBP-201ENST00000240185 RPS26P11Q5JNZ5 115 aaPredicted RBP13.08□□□□□ -0.31
TARDBP-201ENST00000240185 OR4M1Q8NGD0 313 aa13.08□□□□□ -0.31
TARDBP-201ENST00000240185 BTF3L4Q96K17 158 aa13.08□□□□□ -0.31
TARDBP-201ENST00000240185 MARCH4Q9P2E8 410 aaPredicted RBP13.08□□□□□ -0.31
TARDBP-201ENST00000240185 KCNK2O95069 426 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 SELPLGQ14242 412 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 LYPD4Q6UWN0 246 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 RDH10Q8IZV5 341 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 GPR137CQ8N3F9 429 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 KDM1BQ8NB78 822 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 PLPP5Q8NEB5 264 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 RNF141Q8WVD5 230 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 IMP4Q96G21 291 aaKnown RBP13.08□□□□□ -0.32
TARDBP-201ENST00000240185 FN3KRPQ9HA64 309 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 RBMS1P29558 406 aaKnown RBP13.08□□□□□ -0.32
TARDBP-201ENST00000240185 SEC61A1P61619 476 aaKnown RBP13.08□□□□□ -0.32
TARDBP-201ENST00000240185 ADAM5Q6NVV9 412 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 CREB3L4Q8TEY5 395 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 NAA11Q9BSU3 229 aaPredicted RBP13.08□□□□□ -0.32
TARDBP-201ENST00000240185 CXXC1Q9P0U4 656 aaPredicted RBP13.08□□□□□ -0.32
TARDBP-201ENST00000240185 F3P13726 295 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 ACRV1P26436 265 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 GAB1Q13480 694 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 GK3PQ14409 553 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 IRF4Q15306 451 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 IL20RBQ6UXL0 311 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 B3GNT8Q7Z7M8 397 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 BMFQ96LC9 184 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 DDX31Q9H8H2 851 aaKnown RBP13.08□□□□□ -0.32
TARDBP-201ENST00000240185 VRTNQ9H8Y1 702 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 DIP2AQ14689 1571 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 HCRTO43612 131 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 TFAP2AP05549 437 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 FDXRP22570 491 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 HRH2P25021 359 aa13.08□□□□□ -0.32
TARDBP-201ENST00000240185 SQSTM1Q13501 440 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms