RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 HNRNPA3P51991 378 aaKnown RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 SF3B4Q15427 424 aaKnown RBP eCLIP10.51□□□□□ -0.731e-6■■■□□ 16.5
MSH6-201ENST00000234420 TCEAL8Q8IYN2 117 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 BATF2Q8N1L9 274 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 REEP6Q96HR9 211 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 FCRL3Q96P31 734 aaPredicted RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 KCNA7Q96RP8 456 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 CWH43Q9H720 699 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 METTL17Q9H7H0 456 aaPredicted RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 PLSCR3Q9NRY6 295 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 GALPQ9UBC7 116 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 GIMAP2Q9UG22 337 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 DENRO43583 198 aaKnown RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 EPHA5P54756 1037 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 PDZK1IP1Q13113 114 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 KIAA0319Q5VV43 1072 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 RABEPKQ7Z6M1 372 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 THOC6Q86W42 341 aaKnown RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 ADGRF3Q8IZF5 1079 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 NANOS1Q8WY41 292 aaKnown RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 NKD2Q969F2 451 aaPredicted RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 FOXRED1Q96CU9 486 aaPredicted RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 ZNF845Q96IR2 970 aaPredicted RBP10.51□□□□□ -0.73
MSH6-201ENST00000234420 OR6C1Q96RD1 312 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 IFT22Q9H7X7 185 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 COL1A2P08123 1366 aa10.51□□□□□ -0.73
MSH6-201ENST00000234420 DBHP09172 617 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 CSNK2A2P19784 350 aaPredicted RBP10.5□□□□□ -0.73
MSH6-201ENST00000234420 NDST2P52849 883 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 DCAF12Q5T6F0 453 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 ZNF836Q6ZNA1 936 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 LRR1Q96L50 414 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 ACTRT3Q9BYD9 372 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 FZD10Q9ULW2 581 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 VSTM2BA6NLU5 285 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 ETV3P41162 512 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 AWAT2Q6E213 333 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 PAQR3Q6TCH7 311 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 Q6ZSR6 202 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 ERVMER34-1Q9H9K5 563 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 CALHM2Q9HA72 323 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 ZFP57Q9NU63 452 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 DUSP13Q9UII6 198 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 AK6Q9Y3D8 172 aaKnown RBP10.5□□□□□ -0.73
MSH6-201ENST00000234420 ERCC6L2Q5T890 1561 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 A8MT66 165 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 FAM171A2A8MVW0 826 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 J3KR12 359 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 HPGDSO60760 199 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 TOX4O94842 621 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 CBSLP0DN79 551 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 HNRNPH3P31942 346 aaKnown RBP10.5□□□□□ -0.73
MSH6-201ENST00000234420 PRSS3P35030 304 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 CBSP35520 551 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 SLC11A1P49279 550 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 UGT3A2Q3SY77 523 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 PLA1AQ53H76 456 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 PXT1Q8NFP0 134 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 FNDC9Q8TBE3 224 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 FAM213BQ8TBF2 198 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 ACTL8Q9H568 366 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 TTC3P53804 2025 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 LRCH4O75427 683 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 TUSC2O75896 110 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 C6orf47O95873 294 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 PPP3CBP16298 524 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 ABHD18Q0P651 414 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 SLC10A1Q14973 349 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 OPCMLQ14982 345 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 B3GNT9Q6UX72 402 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 NAA40Q86UY6 237 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 SIMC1Q8NDZ2 872 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 STEAP2Q8NFT2 490 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 OR2T33Q8NG76 320 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 OR8U1Q8NH10 309 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 RAB8BQ92930 207 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 NMNAT2Q9BZQ4 307 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 SLC2A9Q9NRM0 540 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 INSL5Q9Y5Q6 135 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 TSPAN6O43657 245 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 CNIH1O95406 144 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 LCATP04180 440 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 ARSAP15289 507 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 IDUAP35475 653 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 EMP3P54852 163 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 MRPL21Q7Z2W9 205 aaKnown RBP10.5□□□□□ -0.73
MSH6-201ENST00000234420 TP53INP2Q8IXH6 220 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 CERS5Q8N5B7 392 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 UBAC2Q8NBM4 344 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 TTLQ8NG68 377 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 GIMAP1Q8WWP7 306 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 CEP170BQ9Y4F5 1589 aaPredicted RBP10.5□□□□□ -0.73
MSH6-201ENST00000234420 PCDHGA1Q9Y5H4 931 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 MAKP20794 623 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 SLC18A1P54219 525 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 CARD18P57730 90 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 CDCA2Q69YH5 1023 aaPredicted RBP10.5□□□□□ -0.73
MSH6-201ENST00000234420 CD163Q86VB7 1156 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 ENTHD1Q8IYW4 607 aa10.5□□□□□ -0.73
MSH6-201ENST00000234420 CCDC71LQ8N9Z2 235 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms