RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 LRRN3Q9H3W5 708 aa16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 SIRT3Q9NTG7 399 aaPredicted RBP16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 BABAM2Q9NXR7 383 aa16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 SOCS6O14544 535 aa16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 C1GALT1C1LP0DN25 315 aa16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 GNSP15586 552 aa16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 ERVK-21P61565 698 aa16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 RPS7P62081 194 aaKnown RBP16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 PITPNAQ00169 270 aa16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 DYRK1AQ13627 763 aa16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 LRRC73Q5JTD7 316 aa16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 FAM83HQ6ZRV2 1179 aaPredicted RBP16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 THAP4Q8WY91 577 aa16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 WDR34Q96EX3 536 aa16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 NPAS1Q99742 590 aa16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 NPDC1Q9NQX5 325 aaPredicted RBP16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 TDP1Q9NUW8 608 aa16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 FBXL2Q9UKC9 423 aa16.51■□□□□ 0.23
CDKN1B-201ENST00000228872 PDE4DIPQ5VU43 2346 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 CKAP5Q14008 2032 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 TEX46H3BTG2 121 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 AIPO00170 330 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 LDOC1O95751 146 aaPredicted RBP16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 ATP5A1P25705 553 aaKnown RBP16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 MTFR2Q6P444 385 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 ALKAL2Q6UX46 152 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 Q6ZNB5 142 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 TPRA1Q86W33 373 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 CPXM2Q8N436 756 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 SMPDL3AQ92484 453 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 CNOT9Q92600 299 aaKnown RBP16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 ABCG4Q9H172 646 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 OR51I1Q9H343 314 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 WDR26Q9H7D7 661 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 CFAP97Q9P2B7 532 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 P2RX2Q9UBL9 471 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 MGAT4CQ9UBM8 478 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 ENTPD4Q9Y227 616 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 DNASE2O00115 360 aaPredicted RBP16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 NTN1O95631 604 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 NPPBP16860 134 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 TBXA2RP21731 343 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 E2F1Q01094 437 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 CDC73Q6P1J9 531 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 SLC9B2Q86UD5 537 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 CLRN3Q8NCR9 226 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 OR11G2Q8NGC1 345 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 OR51G2Q8NGK0 314 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 ZNF480Q8WV37 535 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 TMEM159Q96B96 161 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 FAM46AQ96IP4 442 aaKnown RBP16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 SAV1Q9H4B6 383 aaPredicted RBP16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 KCNK12Q9HB15 430 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 CPNE7Q9UBL6 633 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 DYRK1BQ9Y463 629 aa16.5■□□□□ 0.23
CDKN1B-201ENST00000228872 MCRIP1C9JLW8 97 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 J3QRE1 110 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 TSPAN6O43657 245 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 PRAF2O60831 178 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 SLC2A10O95528 541 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 SLC7A9P82251 487 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 ZDHHC20Q5W0Z9 365 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 HIST2H2AA3Q6FI13 130 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 ARL9Q6T311 187 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 HSD17B13Q7Z5P4 300 aaPredicted RBP16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 OR2AP1Q8NGE2 309 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 SCARB1Q8WTV0 552 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 SCPEP1Q9HB40 452 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 NEUROD4Q9HD90 331 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 MYOFQ9NZM1 2061 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 HNRNPCL2B2RXH8 293 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 BNIP3LO60238 219 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 NR2F1P10589 423 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 NFYAP23511 347 aaPredicted RBP16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 VIPR1P32241 457 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 IFNGR2P38484 337 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 VEGFCP49767 419 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 SIM1P81133 766 aaPredicted RBP16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 FLI1Q01543 452 aaPredicted RBP16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 CAMK1Q14012 370 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 HLXQ14774 488 aaPredicted RBP16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 SFRP4Q6FHJ7 346 aaPredicted RBP16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 C17orf107Q6ZR85 190 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 DGLUCYQ7Z3D6 616 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 CEACAM19Q7Z692 300 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 FAM71CQ8NEG0 241 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 OR5D16Q8NGK9 328 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 XAGE5Q8WWM1 108 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 SCAMP4Q969E2 229 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 TIMP4Q99727 224 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 DPH7Q9BTV6 452 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 ALG8Q9BVK2 526 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 GSDMCQ9BYG8 508 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 TTYH1Q9H313 450 aaPredicted RBP16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 KLHL1Q9NR64 748 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 CA10Q9NS85 328 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 B4GALT6Q9UBX8 382 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 PPIL1Q9Y3C6 166 aa16.49■□□□□ 0.23
CDKN1B-201ENST00000228872 GSTZ1O43708 216 aaPredicted RBP16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 HYAL3O43820 417 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms