RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 RNF215Q9Y6U7 377 aa13.3□□□□□ -0.28
SHPK-201ENST00000225519 UGT2B7P16662 529 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 CXCL2P19875 107 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 RAB3AP20336 220 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 PYCR1P32322 319 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 CCR8P51685 355 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 NCBP2P52298 156 aaKnown RBP eCLIP13.29□□□□□ -0.28
SHPK-201ENST00000225519 EFNB1P98172 346 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 OC90Q02509 493 aaPredicted RBP13.29□□□□□ -0.28
SHPK-201ENST00000225519 TMEM115Q12893 351 aaPredicted RBP13.29□□□□□ -0.28
SHPK-201ENST00000225519 OR5M10Q6IEU7 315 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 TPRA1Q86W33 373 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 OR9A1PQ8NGU1 263 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 PELOQ9BRX2 385 aaKnown RBP13.29□□□□□ -0.28
SHPK-201ENST00000225519 HPF1Q9NWY4 346 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 FLRT2O43155 660 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 SIX6O95475 246 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 C1orf105O95561 183 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 NMBP08949 121 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 ARHGDIBP52566 201 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 E2F1Q01094 437 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 RIPPLY1Q0D2K3 151 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 PRAMEF14Q5SWL7 426 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 PRAMEF13Q5VWM6 474 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 C11orf88Q6PI97 169 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 RPTNQ6XPR3 784 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 STPG2Q8N412 459 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 OR4D9Q8NGE8 314 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 OR52L1Q8NGH7 329 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 SLC25A13Q9UJS0 675 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 A0A1B0GW55 424 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 CARNS1A5YM72 827 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 PLPP1O14494 284 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 PRAF2O60831 178 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 B4GALT2O60909 372 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 DUX4L2P0CJ85 424 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 DUX4L3P0CJ86 424 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 DUX4L4P0CJ87 422 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 DUX4L5P0CJ88 424 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 DUX4L6P0CJ89 424 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 DUX4L7P0CJ90 424 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 HMGA1P17096 107 aaKnown RBP13.29□□□□□ -0.28
SHPK-201ENST00000225519 RAD52P43351 418 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 MMP15P51511 669 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 RAG2P55895 527 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 EIF2B5Q13144 721 aaKnown RBP13.29□□□□□ -0.28
SHPK-201ENST00000225519 ZNF169Q14929 603 aaPredicted RBP13.29□□□□□ -0.28
SHPK-201ENST00000225519 OR13C5Q8NGS8 318 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 ASB12Q8WXK4 309 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 OVCA2Q8WZ82 227 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 TM4SF18Q96CE8 201 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 RNF208Q9H0X6 261 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 SEMA4GQ9NTN9 838 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 MARK1Q9P0L2 795 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 AKAP7Q9P0M2 348 aaPredicted RBP13.29□□□□□ -0.28
SHPK-201ENST00000225519 DUX4Q9UBX2 424 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 AK6Q9Y3D8 172 aaKnown RBP13.29□□□□□ -0.28
SHPK-201ENST00000225519 ZNF175Q9Y473 711 aa13.29□□□□□ -0.28
SHPK-201ENST00000225519 E9PI62 339 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 H0YC42 278 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 CREBL2O60519 120 aaPredicted RBP13.28□□□□□ -0.28
SHPK-201ENST00000225519 GMDSO60547 372 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 BMP7P18075 431 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 NDUFV2P19404 249 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 NTSP30990 170 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 THBS2P35442 1172 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 TMEM173Q86WV6 379 aaPredicted RBP13.28□□□□□ -0.28
SHPK-201ENST00000225519 ORAI3Q9BRQ5 295 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 ANXA2P2A6NMY6 339 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 CACNB4O00305 520 aaPredicted RBP13.28□□□□□ -0.28
SHPK-201ENST00000225519 WDPCPO95876 746 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 S100A11P31949 105 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 ACSM1Q08AH1 577 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 GNA13Q14344 377 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 RGS7BPQ6MZT1 257 aaPredicted RBP13.28□□□□□ -0.28
SHPK-201ENST00000225519 LSRQ86X29 649 aaPredicted RBP13.28□□□□□ -0.28
SHPK-201ENST00000225519 GID4Q8IVV7 300 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 NKAIN4Q8IVV8 208 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 ZNF433Q8N7K0 673 aaPredicted RBP13.28□□□□□ -0.28
SHPK-201ENST00000225519 SUN3Q8TAQ9 357 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 SCARB1Q8WTV0 552 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 PTPN18Q99952 460 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 REG4Q9BYZ8 158 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 MARCH5Q9NX47 278 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 ASF1AQ9Y294 204 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 NTNG1Q9Y2I2 539 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 UBE2QL1A1L167 161 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 PRAMEF27A3QJZ7 478 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 IGHA1P01876 353 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 CHRM4P08173 479 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 ELNP15502 786 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 TBXA2RP21731 343 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 AP3S2P59780 193 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 RAP2BP61225 183 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 APOOLQ6UXV4 268 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 C17orf64Q86WR6 236 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 SERPINA12Q8IW75 414 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 CMTM8Q8IZV2 173 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 FGF11Q92914 225 aa13.28□□□□□ -0.28
SHPK-201ENST00000225519 C4orf36Q96KX1 117 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms