RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 CLEC12BQ2HXU8 276 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 VPS26BQ4G0F5 336 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 ZNF385BQ569K4 471 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 EXOSC6Q5RKV6 272 aaKnown RBP14.04□□□□□ -0.16
NME3-201ENST00000219302 NCMAPQ5T1S8 102 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 HBMQ6B0K9 141 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 GTF2IRD2BQ6EKJ0 949 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 ANKRD26P1Q6NSI1 321 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 GTF2IRD2Q86UP8 949 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 STK32CQ86UX6 486 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 TRABD2AQ86V40 505 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 SLC16A11Q8NCK7 471 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 MAPK1IP1LQ8NDC0 245 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 STEAP2Q8NFT2 490 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 CEP70Q8NHQ1 597 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 MZB1Q8WU39 189 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 ROBO4Q8WZ75 1007 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 ANP32BQ92688 251 aaKnown RBP14.04□□□□□ -0.16
NME3-201ENST00000219302 CIDECQ96AQ7 238 aaPredicted RBP14.04□□□□□ -0.16
NME3-201ENST00000219302 S100PBPQ96BU1 408 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 HDHD5Q9BXW7 423 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 C12orf49Q9H741 205 aa14.04□□□□□ -0.16
NME3-201ENST00000219302 RRAGDQ9NQL2 400 aaPredicted RBP14.04□□□□□ -0.16
NME3-201ENST00000219302 UQCRHLA0A096LP55 91 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 RNF223E7ERA6 249 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 H3BQF6 201 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 TBX19O60806 448 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 URI1O94763 535 aaPredicted RBP14.03□□□□□ -0.16
NME3-201ENST00000219302 NTN1O95631 604 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 SOD3P08294 240 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 LINGO3P0C6S8 592 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 PYGBP11216 843 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 SHC1P29353 583 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 LCN1P31025 176 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 FRKP42685 505 aaPredicted RBP14.03□□□□□ -0.16
NME3-201ENST00000219302 PRKAG1P54619 331 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 CARD18P57730 90 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 DUSP5Q16690 384 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 FIGNL1Q6PIW4 674 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 TFAP2EQ6VUC0 442 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 ZYG11AQ6WRX3 759 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 DNAJC14Q6Y2X3 702 aaPredicted RBP14.03□□□□□ -0.16
NME3-201ENST00000219302 FRMD7Q6ZUT3 714 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 NUFIP2Q7Z417 695 aaKnown RBP14.03□□□□□ -0.16
NME3-201ENST00000219302 LILRA2Q8N149 483 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 NUP43Q8NFH3 380 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 OR6Y1Q8NGX8 325 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 RNF128Q8TEB7 428 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 CCDC126Q96EE4 140 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 KLHL15Q96M94 604 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 REG4Q9BYZ8 158 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 TMEM185BQ9H7F4 350 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 UBQLN4Q9NRR5 601 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 DCDC2Q9UHG0 476 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 ALPK2Q86TB3 2170 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 MXRA5Q9NR99 2828 aa14.03□□□□□ -0.16
NME3-201ENST00000219302 A0A1W2PQD3 144 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 PDPK1O15530 556 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 SEC22BO75396 215 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 GPC1P35052 558 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 ZNF41P51814 821 aaPredicted RBP14.02□□□□□ -0.17
NME3-201ENST00000219302 MANFP55145 182 aaKnown RBP14.02□□□□□ -0.17
NME3-201ENST00000219302 NAA20P61599 178 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 TSC22D1Q15714 1073 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 TAB1Q15750 504 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 CD226Q15762 336 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 ETFDHQ16134 617 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 ZNF239Q16600 458 aaKnown RBP14.02□□□□□ -0.17
NME3-201ENST00000219302 PDSS1Q5T2R2 415 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 SFRP5Q5T4F7 317 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 SEZ6L2Q6UXD5 910 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 DNM1P46Q6ZS02 220 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 Q6ZSR9 355 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 MISPQ8IVT2 679 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 TUSC5Q8IXB3 177 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 ABHD3Q8WU67 409 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 NEUROG1Q92886 237 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 TRMT61AQ96FX7 289 aaKnown RBP14.02□□□□□ -0.17
NME3-201ENST00000219302 C16orf58Q96GQ5 468 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 SH3YL1Q96HL8 342 aaPredicted RBP14.02□□□□□ -0.17
NME3-201ENST00000219302 FCRL1Q96LA6 429 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 SRXN1Q9BYN0 137 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 RNF115Q9Y4L5 304 aa14.02□□□□□ -0.17
NME3-201ENST00000219302 A0A1W2PPM1 405 aa14.01□□□□□ -0.17
NME3-201ENST00000219302 RIPK2O43353 540 aa14.01□□□□□ -0.17
NME3-201ENST00000219302 PROCP04070 461 aa14.01□□□□□ -0.17
NME3-201ENST00000219302 PABPC4LP0CB38 370 aaKnown RBP14.01□□□□□ -0.17
NME3-201ENST00000219302 UROSP10746 265 aa14.01□□□□□ -0.17
NME3-201ENST00000219302 MYL2P10916 166 aa14.01□□□□□ -0.17
NME3-201ENST00000219302 ME2P23368 584 aa14.01□□□□□ -0.17
NME3-201ENST00000219302 ADH6P28332 368 aa14.01□□□□□ -0.17
NME3-201ENST00000219302 IDUAP35475 653 aa14.01□□□□□ -0.17
NME3-201ENST00000219302 PRIM2P49643 509 aa14.01□□□□□ -0.17
NME3-201ENST00000219302 DNAJB13P59910 316 aa14.01□□□□□ -0.17
NME3-201ENST00000219302 DMTNQ08495 405 aa14.01□□□□□ -0.17
NME3-201ENST00000219302 PDE7AQ13946 482 aa14.01□□□□□ -0.17
NME3-201ENST00000219302 VEZF1Q14119 521 aa14.01□□□□□ -0.17
NME3-201ENST00000219302 CCNJQ5T5M9 372 aa14.01□□□□□ -0.17
NME3-201ENST00000219302 ALKBH2Q6NS38 261 aa14.01□□□□□ -0.17
NME3-201ENST00000219302 ZCCHC12Q6PEW1 402 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms