RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 GLYR1Q49A26 553 aaPredicted RBP13.49□□□□□ -0.25
UPK3A-201ENST00000216211 Q6ZSR9 355 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 SZRD1Q7Z422 152 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 NUP43Q8NFH3 380 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 CLHC1Q8NHS4 586 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 PPP1R14CQ8TAE6 165 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 FBXO30Q8TB52 745 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 C10orf82Q8WW14 230 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 SLC9A6Q92581 669 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 METTL2AQ96IZ6 378 aaKnown RBP13.49□□□□□ -0.25
UPK3A-201ENST00000216211 FCRL1Q96LA6 429 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 TSSK3Q96PN8 268 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 TUBB1Q9H4B7 451 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 RNF122Q9H9V4 155 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 NEUROD4Q9HD90 331 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 BEX4Q9NWD9 120 aaPredicted RBP13.49□□□□□ -0.25
UPK3A-201ENST00000216211 VDAC3Q9Y277 283 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 ZNF175Q9Y473 711 aa13.49□□□□□ -0.25
UPK3A-201ENST00000216211 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 IGLV3-32A0A0A0MS00 114 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 NPIPB8E9PQR5 432 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 EMC8O43402 210 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 NKX2-2O95096 273 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 LINC00032P0C843 101 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 ACP2P11117 423 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 CCKARP32238 428 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 MAP3K8P41279 467 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 KCNJ5P48544 419 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 SLC1A6P48664 564 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 MANFP55145 182 aaKnown RBP13.48□□□□□ -0.25
UPK3A-201ENST00000216211 RPS3AP61247 264 aaKnown RBP13.48□□□□□ -0.25
UPK3A-201ENST00000216211 RPL38P63173 70 aaKnown RBP13.48□□□□□ -0.25
UPK3A-201ENST00000216211 SGCBQ16585 318 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 PPP4R4Q6NUP7 873 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 TRPM8Q7Z2W7 1104 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 ZNF550Q7Z398 422 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 KRTAP1-3Q8IUG1 177 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 METTL25Q8N6Q8 603 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 ZNF610Q8N9Z0 462 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 GATSQ8NAP1 163 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 ZFP28Q8NHY6 868 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 HOXB13Q92826 284 aaPredicted RBP13.48□□□□□ -0.25
UPK3A-201ENST00000216211 PPCDCQ96CD2 204 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 GIMAP5Q96F15 307 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 PIK3IP1Q96FE7 263 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 NPAS1Q99742 590 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 MED18Q9BUE0 208 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 GATA5Q9BWX5 397 aaPredicted RBP13.48□□□□□ -0.25
UPK3A-201ENST00000216211 C20orf27Q9GZN8 174 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 REEP4Q9H6H4 257 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 ELOVL5Q9NYP7 299 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 ZNF226Q9NYT6 803 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 SH3BP4Q9P0V3 963 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 BAIAP2L1Q9UHR4 511 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 PROCRQ9UNN8 238 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 AP4B1Q9Y6B7 739 aa13.48□□□□□ -0.25
UPK3A-201ENST00000216211 DSCAMO60469 2012 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 DEFB108AA8MXU0 73 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 EIF1AYO14602 144 aaKnown RBP13.47□□□□□ -0.25
UPK3A-201ENST00000216211 NDUFB5O43674 189 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 TBX19O60806 448 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 AQP8O94778 261 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 OXSR1O95747 527 aaPredicted RBP13.47□□□□□ -0.25
UPK3A-201ENST00000216211 CD8BP10966 210 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 EFNA1P20827 205 aaPredicted RBP13.47□□□□□ -0.25
UPK3A-201ENST00000216211 CRYGSP22914 178 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 UGT2B10P36537 528 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 ABCE1P61221 599 aaKnown RBP13.47□□□□□ -0.25
UPK3A-201ENST00000216211 NKX6-1P78426 367 aaPredicted RBP13.47□□□□□ -0.25
UPK3A-201ENST00000216211 SF3A3Q12874 501 aaKnown RBP eCLIP13.47□□□□□ -0.25
UPK3A-201ENST00000216211 GUSBP1Q15486 140 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 TMEM44Q2T9K0 475 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 GALNTL6Q49A17 601 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 VPS26BQ4G0F5 336 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 RFTN2Q52LD8 501 aaPredicted RBP13.47□□□□□ -0.25
UPK3A-201ENST00000216211 KANK2Q63ZY3 851 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 FIGNL1Q6PIW4 674 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 ZCCHC23Q6ZST2 131 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 ZAR1Q86SH2 424 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 GGNQ86UU5 652 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 CXorf67Q86X51 503 aaPredicted RBP13.47□□□□□ -0.25
UPK3A-201ENST00000216211 CDRT4Q8N9R6 151 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 SLC16A11Q8NCK7 471 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 OR4C3Q8NH37 302 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 CEP70Q8NHQ1 597 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 RFWD2Q8NHY2 731 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 ZBED6CLQ96FA7 236 aaPredicted RBP13.47□□□□□ -0.25
UPK3A-201ENST00000216211 OTUB1Q96FW1 271 aaPredicted RBP13.47□□□□□ -0.25
UPK3A-201ENST00000216211 ZC3HAV1LQ96H79 300 aaKnown RBP13.47□□□□□ -0.25
UPK3A-201ENST00000216211 ZNF764Q96H86 408 aaPredicted RBP13.47□□□□□ -0.25
UPK3A-201ENST00000216211 CCT7Q99832 543 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 SMR3AQ99954 134 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 SIKE1Q9BRV8 207 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 SLC39A3Q9BRY0 314 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 ZNF395Q9H8N7 513 aaPredicted RBP13.47□□□□□ -0.25
UPK3A-201ENST00000216211 NPHS2Q9NP85 383 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 FBXO34Q9NWN3 711 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 DNAJC15Q9Y5T4 150 aa13.47□□□□□ -0.25
UPK3A-201ENST00000216211 NUP214P35658 2090 aaPredicted RBP13.47□□□□□ -0.25
UPK3A-201ENST00000216211 TMEM233B4DJY2 109 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms