RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 UGT2B7P16662 529 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 AOAHP28039 575 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 OPRL1P41146 370 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 HTR3AP46098 478 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 WDR5P61964 334 aaKnown RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 DCST2Q5T1A1 773 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 FRMPD2BQ6IN97 320 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 ZNF480Q8WV37 535 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 INTS14Q96SY0 518 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 C7orf50Q9BRJ6 194 aaKnown RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 SAP130Q9H0E3 1048 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 CLMPQ9H6B4 373 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 TEX10Q9NXF1 929 aaPredicted RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 SLC6A5Q9Y345 797 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 NUBP2Q9Y5Y2 271 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 XRN1Q8IZH2 1706 aaKnown RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 DCDC2BA2VCK2 349 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 BLACEA4D250 179 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 ADAMTS4O75173 837 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 SERPINA5P05154 406 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 TIMP2P16035 220 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 TUBB3Q13509 450 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 SF3A2Q15428 464 aaKnown RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 FAM69AQ5T7M9 428 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 UBE2UQ5VVX9 321 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 DUS1LQ6P1R4 473 aaKnown RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 NLGN4XQ8N0W4 816 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 HINT2Q9BX68 163 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 KCMF1Q9P0J7 381 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 EMCNQ9ULC0 261 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 AK6Q9Y3D8 172 aaKnown RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 BAZ2AQ9UIF9 1905 aaKnown RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 A0A0A6YYH2 397 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 A6NJ64 397 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 H3BML4 177 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 CDK1P06493 297 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 ZNF28P17035 718 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 PRLHRP49683 370 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 CTSCP53634 463 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 BOLLQ8N9W6 283 aaKnown RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 OR51T1Q8NGJ9 327 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 MAN2C1Q9NTJ4 1040 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 ACSS1Q9NUB1 689 aaPredicted RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 CNTRLQ7Z7A1 2325 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 FRS3O43559 492 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 CRTAPO75718 401 aaPredicted RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 CNOT4O95628 575 aaKnown RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 RAB3AP20336 220 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 SFTPDP35247 375 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 TNFRSF4P43489 277 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 POLR2HP52434 150 aaKnown RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 TMEM184AQ6ZMB5 413 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 SGPP2Q8IWX5 399 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 ADAMTS14Q8WXS8 1223 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 RADILQ96JH8 1075 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 SLC6A14Q9UN76 642 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 IFNA10P01566 189 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 CD63P08962 238 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 XCR1P46094 333 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 FAM83HQ6ZRV2 1179 aaPredicted RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 MCATQ8IVS2 390 aaKnown RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 C3orf58Q8NDZ4 430 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 OR9A4Q8NGU2 314 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 TMEM174Q8WUU8 243 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 TMIGD2Q96BF3 282 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 FAM71F1Q96KD3 344 aaPredicted RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 OR5B2Q96R09 309 aa12.76□□□□□ -0.37
SF3A1-201ENST00000215793 USP36Q9P275 1121 aaKnown RBP12.76□□□□□ -0.37
SF3A1-201ENST00000215793 PHLPP1O60346 1717 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 AKAP12Q02952 1782 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 FAM171A2A8MVW0 826 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 ZNF736B4DX44 427 aaPredicted RBP12.75□□□□□ -0.37
SF3A1-201ENST00000215793 HTR2BP41595 481 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 GPR50Q13585 617 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 ACSM3Q53FZ2 586 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 AKR1C8PQ5T2L2 129 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 MFSD6LQ8IWD5 586 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 GATA6Q92908 595 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 AP1S3Q96PC3 154 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 INIPQ9NRY2 104 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 SLC22A7Q9Y694 548 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 SULT2B1O00204 365 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 IFNA4P05014 189 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 FGFBP1Q14512 234 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 GPR139Q6DWJ6 353 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 KCTD20Q7Z5Y7 419 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 TMEM130Q8N3G9 435 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 SDR9C7Q8NEX9 313 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 GTF2H4Q92759 462 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 SLC46A2Q9BY10 475 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 CHRDQ9H2X0 955 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 PCDHGA8Q9Y5G5 932 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 CACNG2Q9Y698 323 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 PRRC2BQ5JSZ5 2229 aaKnown RBP12.75□□□□□ -0.37
SF3A1-201ENST00000215793 FUOMA2VDF0 154 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 SGK494L7N484 410 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 C1orf105O95561 183 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 FBXO45P0C2W1 286 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 ARSAP15289 507 aa12.75□□□□□ -0.37
SF3A1-201ENST00000215793 AHRP35869 848 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms