RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 C21orf62-AS1Q17RA5 79 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 C18orf21Q32NC0 220 aaPredicted RBP9.87□□□□□ -0.83
VCL-201ENST00000211998 C6orf120Q7Z4R8 191 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 OR52E2Q8NGJ4 325 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 KIAA1143Q96AT1 154 aaPredicted RBP9.87□□□□□ -0.83
VCL-201ENST00000211998 C3orf30Q96M34 536 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 DCLRE1CQ96SD1 692 aaKnown RBP9.87□□□□□ -0.83
VCL-201ENST00000211998 WNT6Q9Y6F9 365 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 KNDC1Q76NI1 1749 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 PEX12O00623 359 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 PIRO00625 290 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 DNAJB6O75190 326 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 HLA-AP01891 365 aaKnown RBP9.87□□□□□ -0.83
VCL-201ENST00000211998 FABP1P07148 127 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 LAMP1P11279 417 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 RAB4AP20338 218 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 G0S2P27469 103 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 HTR3AP46098 478 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 RNF144AP50876 292 aaPredicted RBP9.87□□□□□ -0.83
VCL-201ENST00000211998 BCL2A1Q16548 175 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 TMPRSS9Q7Z410 1059 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 CLDN22Q8N7P3 220 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 CLRN3Q8NCR9 226 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 IL17RDQ8NFM7 739 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 OR4K17Q8NGC6 315 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 OR52N2Q8NGI0 321 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 HPSE2Q8WWQ2 592 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 LRIG1Q96JA1 1093 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 BTBD2Q9BX70 525 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 TAS2R16Q9NYV7 291 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 PURGQ9UJV8 347 aaKnown RBP9.87□□□□□ -0.83
VCL-201ENST00000211998 B3GALT1Q9Y5Z6 326 aa9.87□□□□□ -0.83
VCL-201ENST00000211998 SLC2A5P22732 501 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 PLGLB1Q02325 96 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 HYAL4Q2M3T9 481 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 ITPRIPL2Q3MIP1 535 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 ARHGAP40Q5TG30 622 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 ARHGAP11AQ6P4F7 1023 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 ZNF574Q6ZN55 896 aaPredicted RBP9.86□□□□□ -0.83
VCL-201ENST00000211998 LAS2Q8IYD9 372 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 ZNF680Q8NEM1 530 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 RAB7BQ96AH8 199 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 TMEM19Q96HH6 336 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 OCSTAMPQ9BR26 566 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 PIGMQ9H3S5 423 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 NARFLQ9H6Q4 476 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 PLEKHM1Q9Y4G2 1056 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 GPR45Q9Y5Y3 372 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 FAM72CH0Y354 149 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 H7C1Q1 480 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 SLC10A3P09131 477 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 FBXO45P0C2W1 286 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 NME2P22392 152 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 CPT2P23786 658 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 HRH2P25021 359 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 ARNTP27540 789 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 DAPP51397 102 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 HTD2P86397 168 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 NFATC2Q13469 925 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 FAM72AQ5TYM5 149 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 FAM72DQ6L9T8 149 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 FAM72BQ86X60 149 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 RTP4Q96DX8 246 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 TRIB3Q96RU7 358 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 KCNK12Q9HB15 430 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 USP22Q9UPT9 525 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 TMEM14AQ9Y6G1 99 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 LGALS8O00214 317 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 SCG5P05408 212 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 ARAFP10398 606 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 CCR6P51684 374 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 RING1Q06587 406 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 EXOSC2Q13868 293 aaKnown RBP9.86□□□□□ -0.83
VCL-201ENST00000211998 OR2G6Q5TZ20 316 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.86□□□□□ -0.83
VCL-201ENST00000211998 OR6M1Q8NGM8 313 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 OR10R2Q8NGX6 335 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 SLC2A11Q9BYW1 496 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 SERTAD3Q9UJW9 196 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 GJD2Q9UKL4 321 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 GAPDHSO14556 408 aaPredicted RBP9.86□□□□□ -0.83
VCL-201ENST00000211998 RAD51DO75771 328 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 GDNFP39905 211 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 AKR1C2P52895 323 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 HCCSP53701 268 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 RPS25P62851 125 aaKnown RBP9.86□□□□□ -0.83
VCL-201ENST00000211998 RNF4P78317 190 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 AKR1C1Q04828 323 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 PHF19Q5T6S3 580 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 LRFN4Q6PJG9 635 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 PRSS42Q7Z5A4 293 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 SAMD8Q96LT4 415 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 MRI1Q9BV20 369 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 TXNRD2Q9NNW7 524 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 CSNK1G3Q9Y6M4 447 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 OR2A25A4D2G3 310 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 LRIT2A6NDA9 550 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 ARNTLO00327 626 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 SLC16A5O15375 505 aa9.86□□□□□ -0.83
VCL-201ENST00000211998 HCRTO43612 131 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms