RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PODNL1Q6PEZ8 512 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 CCDC71Q8IV32 467 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 MORN4Q8NDC4 146 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 SETD9Q8NE22 299 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 OR1N1Q8NGS0 311 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 NR4A3Q92570 626 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ADIPOR1Q96A54 375 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 NODALQ96S42 347 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 SPSB2Q99619 263 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 MCHR1Q99705 422 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 SEMA4GQ9NTN9 838 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 GMPPBQ9Y5P6 360 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 RIF1Q5UIP0 2472 aaKnown RBP18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 FOXD2O60548 495 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 GKN3PP0CG01 181 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 PRG2P13727 222 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 LSM11P83369 360 aaKnown RBP eCLIP18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 C9orf40Q8IXQ3 194 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 PARP8Q8N3A8 854 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ZNF614Q8N883 585 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 MUL1Q969V5 352 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 DTNBP1Q96EV8 351 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 SLC26A1Q9H2B4 701 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 TMEM9BQ9NQ34 198 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 COPS7AQ9UBW8 275 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 HSPE1-MOB4S4R3N1 261 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 FREM2Q5SZK8 3169 aa18.16■□□□□ 0.5
TNFRSF1A-201ENST00000162749 EXPH5Q8NEV8 1989 aa18.16■□□□□ 0.5
TNFRSF1A-201ENST00000162749 IGHV3-20A0A0C4DH32 117 aa18.16■□□□□ 0.5
TNFRSF1A-201ENST00000162749 CYP7B1O75881 506 aa18.16■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ADAP00813 363 aa18.16■□□□□ 0.5
TNFRSF1A-201ENST00000162749 HEXBP07686 556 aa18.16■□□□□ 0.5
TNFRSF1A-201ENST00000162749 EBPQ15125 230 aaKnown RBP18.16■□□□□ 0.5
TNFRSF1A-201ENST00000162749 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.16■□□□□ 0.5
TNFRSF1A-201ENST00000162749 CCDC157Q569K6 752 aa18.16■□□□□ 0.5
TNFRSF1A-201ENST00000162749 KLHL17Q6TDP4 642 aa18.16■□□□□ 0.5
TNFRSF1A-201ENST00000162749 HRASLS5Q96KN8 279 aa18.16■□□□□ 0.5
TNFRSF1A-201ENST00000162749 PITX2Q99697 317 aa18.16■□□□□ 0.5
TNFRSF1A-201ENST00000162749 THY1P04216 161 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 GPR143P51810 404 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 RPP38P78345 283 aaKnown RBP18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ST3GAL3Q11203 375 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 DCTN2Q13561 401 aaKnown RBP18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ZNF141Q15928 474 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 MRPL14Q6P1L8 145 aaKnown RBP18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 PGBD2Q6P3X8 592 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 Q6ZPB1 254 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 PLEKHM3Q6ZWE6 761 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 AMER2Q8N7J2 671 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 OR4K5Q8NGD3 323 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 UBE2FQ969M7 185 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 EFHD2Q96C19 240 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 LCORQ96JN0 433 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 GAL3ST4Q96RP7 486 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 CMKLR1Q99788 373 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ARMC7Q9H6L4 198 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 MPDZO75970 2070 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 C2orf92A0A1B0GVN3 265 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ALOX12BO75342 701 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 INMTO95050 263 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ITIH1P19827 911 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 DRD5P21918 477 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 NFATC3Q12968 1075 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 DECR1Q16698 335 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ANKRD37Q7Z713 158 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 RANBP3LQ86VV4 465 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 OR4C3Q8NH37 302 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 DGCR6LQ9BY27 220 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 DUSP21Q9H596 190 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ERVK-18Q9QC07 812 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 MGAT4BQ9UQ53 548 aa18.15■□□□□ 0.5
TNFRSF1A-201ENST00000162749 A0A087WUU8 490 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 FRG2CA6NGY1 282 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 HTR2AP28223 471 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 IFNA8P32881 189 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ENTPD1P49961 510 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ATP12AP54707 1039 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 GP2P55259 537 aaKnown RBP18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SLC35A2P78381 396 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 EMX1Q04741 257 aaPredicted RBP18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 MAD2L1BPQ15013 274 aaPredicted RBP18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TRAM2Q15035 370 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SMN1Q16637 294 aaKnown RBP18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 GRAMD2AQ8IUY3 354 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CNOT9Q92600 299 aaKnown RBP18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 RHNO1Q9BSD3 238 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ULBP3Q9BZM4 244 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 NRSN2Q9GZP1 204 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ANKRD19PQ9H560 264 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 PCDHGB1Q9Y5G3 927 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 SNX5Q9Y5X3 404 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 OR5F1O95221 314 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 ZNF182P17025 639 aaPredicted RBP18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CCNA2P20248 432 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 CXCR4P61073 352 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 TARDBPQ13148 414 aaKnown RBP eCLIP18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 FGFBP1Q14512 234 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 FAM199XQ6PEV8 388 aaPredicted RBP18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 GDF7Q7Z4P5 450 aa18.14■□□□□ 0.49
TNFRSF1A-201ENST00000162749 FAR1Q8WVX9 515 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms