RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TRABD2AQ86V40 505 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 GSPT2Q8IYD1 628 aaKnown RBP14.22□□□□□ -0.13
ERCC1-201ENST00000013807 NATD1Q8N6N6 113 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 BANPQ8N9N5 519 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 OR10D3Q8NH80 312 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 EPS8L3Q8TE67 593 aaKnown RBP14.22□□□□□ -0.13
ERCC1-201ENST00000013807 SLC9A6Q92581 669 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 FAM120BQ96EK7 910 aaKnown RBP14.22□□□□□ -0.13
ERCC1-201ENST00000013807 NPAS1Q99742 590 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 BTBD2Q9BX70 525 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 PIGUQ9H490 435 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 MED17Q9NVC6 651 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 FBXO34Q9NWN3 711 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 VDAC3Q9Y277 283 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 EMC9Q9Y3B6 208 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 TRAF6Q9Y4K3 522 aa14.22□□□□□ -0.13
ERCC1-201ENST00000013807 FAM171A2A8MVW0 826 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 TMEM114B3SHH9 223 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 SHISA8B8ZZ34 492 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 EIF1AYO14602 144 aaKnown RBP14.21□□□□□ -0.13
ERCC1-201ENST00000013807 KLF4O43474 513 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 AKAP10O43572 662 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 HMGN2P05204 90 aaKnown RBP14.21□□□□□ -0.13
ERCC1-201ENST00000013807 THBDP07204 575 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 ALOX5P09917 674 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 LINGO3P0C6S8 592 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 PAX1P15863 534 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 ADH6P28332 368 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 RPL3P39023 403 aaKnown RBP14.21□□□□□ -0.13
ERCC1-201ENST00000013807 EIF1P41567 113 aaKnown RBP14.21□□□□□ -0.13
ERCC1-201ENST00000013807 EIF1AXP47813 144 aaKnown RBP14.21□□□□□ -0.13
ERCC1-201ENST00000013807 KCNJ5P48544 419 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 PRIM2P49643 509 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 RPL38P63173 70 aaKnown RBP14.21□□□□□ -0.13
ERCC1-201ENST00000013807 XKR7Q5GH72 579 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 ARL13AQ5H913 290 aaPredicted RBP14.21□□□□□ -0.13
ERCC1-201ENST00000013807 STAC2Q6ZMT1 411 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 C4orf33Q8N1A6 199 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 LRRN4CLQ8ND94 238 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 PPP1R14CQ8TAE6 165 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 POC1BQ8TC44 478 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 ARSGQ96EG1 525 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 PIK3IP1Q96FE7 263 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 C16orf58Q96GQ5 468 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 MCTS1Q9ULC4 181 aaKnown RBP14.21□□□□□ -0.13
ERCC1-201ENST00000013807 ACTL7BQ9Y614 415 aa14.21□□□□□ -0.13
ERCC1-201ENST00000013807 HIVEP2P31629 2446 aa14.21□□□□□ -0.14
ERCC1-201ENST00000013807 A0A0J9YW62 118 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 SMPD2O60906 423 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 TMCC2O75069 709 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 LYPLA1O75608 230 aaPredicted RBP14.2□□□□□ -0.14
ERCC1-201ENST00000013807 CHRNGP07510 517 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 ELK4P28324 431 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 ALDH3A1P30838 453 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 SERPINB5P36952 375 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 ZNF41P51814 821 aaPredicted RBP14.2□□□□□ -0.14
ERCC1-201ENST00000013807 LTBQ06643 244 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 KLHL26Q53HC5 615 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 GTF2IRD2BQ6EKJ0 949 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 FIGNL1Q6PIW4 674 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 BEND4Q6ZU67 534 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 ZNF550Q7Z398 422 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 GTF2IRD2Q86UP8 949 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 RIBC1Q8N443 379 aaPredicted RBP14.2□□□□□ -0.14
ERCC1-201ENST00000013807 OR2V1Q8NHB1 315 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 B4GALNT2Q8NHY0 566 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 TWIST2Q8WVJ9 160 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 COQ8BQ96D53 544 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 APOPT1Q96IL0 206 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 COX4I2Q96KJ9 171 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 PPP3R2Q96LZ3 170 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 HS3ST6Q96QI5 342 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 HOXD1Q9GZZ0 328 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 L2HGDHQ9H9P8 463 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 EML4Q9HC35 981 aaKnown RBP14.2□□□□□ -0.14
ERCC1-201ENST00000013807 GP6Q9HCN6 339 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 FANCFQ9NPI8 374 aa14.2□□□□□ -0.14
ERCC1-201ENST00000013807 SCDO00767 359 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 SCAMP2O15127 329 aaKnown RBP14.19□□□□□ -0.14
ERCC1-201ENST00000013807 NUDT17P0C025 328 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 HPGDP15428 266 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 PSMB1P20618 241 aaKnown RBP14.19□□□□□ -0.14
ERCC1-201ENST00000013807 MAPK1P28482 360 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 CTBP2P56545 445 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 POU6F2P78424 691 aaPredicted RBP14.19□□□□□ -0.14
ERCC1-201ENST00000013807 CD226Q15762 336 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 GALNTL6Q49A17 601 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 BEX5Q5H9J7 111 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 CDC73Q6P1J9 531 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 GALNT10Q86SR1 603 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 P3H2Q8IVL5 708 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 COX18Q8N8Q8 333 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 CLHC1Q8NHS4 586 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 RNF145Q96MT1 663 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 SMR3AQ99954 134 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 TMEM204Q9BSN7 226 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 PRRG4Q9BZD6 226 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 GSX2Q9BZM3 304 aa14.19□□□□□ -0.14
ERCC1-201ENST00000013807 ZCCHC3Q9NUD5 404 aaKnown RBP14.19□□□□□ -0.14
ERCC1-201ENST00000013807 GPATCH2Q9NW75 528 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms