RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Bbs4Q8C1Z7 520 aa10.85□□□□□ -0.67
Sdc1-201ENSMUST00000020911 PxnQ8VI36 591 aa10.85□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Mrgpra4Q91WW2 313 aa10.85□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Pramel1Q99MW3 458 aa10.85□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Med11Q9D8C6 117 aa10.85□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Tmem185aA2AF53 350 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Lsm2O35900 95 aaKnown RBP10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Cdc6O89033 562 aaKnown RBP10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 NfyaP23708 346 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Gja4P28235 333 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Hrh1P70174 488 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Cxcr5Q04683 374 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Sox14Q04892 240 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Prss48Q14B25 312 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Zbtb2Q3V3W4 514 aaKnown RBP10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Klhl5Q6PFE1 708 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Ubfd1Q78JW9 368 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Marveld1Q7TQJ1 173 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 B3gnt5Q8BGY6 376 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Tusc3Q8BTV1 347 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Henmt1Q8CAE2 395 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 HinfpQ8K1K9 503 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Uqcr10Q8R1I1 64 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Cadm1Q8R5M8 456 aaKnown RBP10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 VitQ8VHI5 650 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Pcdhga12Q91XY7 932 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 AldobQ91Y97 364 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Slc25a37Q920G8 338 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 HaghQ99KB8 309 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Cmc1Q9CPZ8 106 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Q9D937 123 aaKnown RBP10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Ap3s1Q9DCR2 193 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Ptges3Q9R0Q7 160 aaKnown RBP10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Kcne4Q9WTW3 170 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Igkv17-121A0A0G2JFA8 117 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Oas1eA0A0J9YV76 386 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Mpeg1A1L314 713 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Skint11A7XV14 364 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Aadacl2B2RWD2 401 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Fam151bD3YUE4 279 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 4930455H04RikD3Z622 58 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Gm21876F6XK35 94 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Vmn1r13G5E8I3 300 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Gm3159K7N760 267 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 P01664 111 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Cyp21P03940 487 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Bpifa2P07743 235 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Inpp1P49442 396 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Gpr160Q3U3F9 336 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Ceacam12Q3UKP4 300 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Nlrc3Q5DU56 1064 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Taar7dQ5QD10 358 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Zdhhc8Q5Y5T5 762 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Znf354aQ61751 572 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 ShbQ6PD21 503 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Nudt15Q8BG93 170 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Nyap2Q8BM65 682 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Slc43a1Q8BSM7 564 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Lrrc20Q8CI70 184 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Sirt3Q8R104 334 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Ugt2b37Q8VCN3 530 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Tmem33Q9CR67 247 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 SmpxQ9DC77 85 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Olfr2Q9QWU6 327 aa10.84□□□□□ -0.67
Sdc1-201ENSMUST00000020911 Zfp69A2A761 587 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 SelenovD3YXG1 328 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Gm21319F6YNI8 144 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Btg4O70552 250 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Hsd3b3P26150 373 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 TstP52196 297 aaKnown RBP10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Lrrc3P59034 257 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Fabp5Q05816 135 aaKnown RBP10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Gpr55Q3UJF0 327 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Plpp5Q3UMZ3 260 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 PtprjQ64455 1238 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Olfr1058Q7TR74 316 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Sgpp2Q810K3 354 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Tns4Q8BZ33 696 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Esco2Q8CIB9 592 aaKnown RBP10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Tmed9Q99KF1 235 aaKnown RBP10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 NtmQ99PJ0 344 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Copz2Q9JHH9 205 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Adat1Q9JHI2 499 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Znf318Q99PP2 2237 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Rpl7a-ps3A0A140T8L1 270 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Rpl7a-ps5A0A140T8L3 268 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Dpy19l1A6X919 746 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Vmn1r77E9PY60 306 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Vmn1r16K7N775 303 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 P01668 110 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Ptger3P30557 365 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Aqp2P56402 271 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Ube2iP63280 158 aaKnown RBP10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 EpycP70186 322 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Arf5P84084 180 aaKnown RBP10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Gjb5Q02739 271 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 KcnrgQ2TUM3 264 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Mansc4Q3UU94 337 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Eri2Q5BKS4 688 aa10.83□□□□□ -0.68
Sdc1-201ENSMUST00000020911 Rsl1Q7M6Y1 485 aa10.83□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms