RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Cstf1Q99LC2 431 aaKnown RBP15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Arfgap1Q9EPJ9 414 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Ulk2Q9QY01 1037 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Olfr1508Q9R0K4 310 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 4931422A03RikA2BHN9 113 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Olfr723E9PZU2 309 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Olfr724K7N5X7 309 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Il1bP10749 269 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Acyp2P56375 106 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Ufd1P70362 307 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Apoc2Q05020 97 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Bcl2a1cQ0P538 128 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Ltc4sQ60860 150 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Avpr1aQ62463 423 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Azgp1Q64726 307 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Ap4e1Q80V94 1122 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Fam110bQ8C739 366 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Aldh4a1Q8CHT0 562 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 CipcQ8R0W1 432 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Olfr658Q8VGV5 323 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Cxxc5Q91WA4 317 aaKnown RBP15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Stra6lQ9DBN1 621 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Wdr61Q9ERF3 305 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Sectm1bQ9JL59 212 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Aldh9a1Q9JLJ2 494 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Eif3gQ9Z1D1 320 aaKnown RBP15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Tmsb15aA2AEH9 79 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 TrhrP21761 393 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Htr1fQ02284 366 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Tdpoz5Q6YCH1 340 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Gpr119Q7TQP3 335 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Vtcn1Q7TSP5 283 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 4921517D22RikQ8CET0 269 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Crispld1Q8CGD2 500 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Emc3Q99KI3 261 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Kdm8Q9CXT6 414 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Vmn1r56Q9EPS9 310 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Ca5bQ9QZA0 317 aa15.81■□□□□ 0.12
Ctcf-201ENSMUST00000005841 6430628N08RikA0A0U1RQ45 177 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Gm5938A2AEN9 163 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Sdccag3A2AIW0 432 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Olfr1314A2AVL6 312 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Cldn34b1B1AZQ8 209 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Sult2a3D3Z1W5 285 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Gja1P23242 382 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Ttyh2Q3TH73 532 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Spag8Q3V0Q6 470 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Bloc1s3Q5U5M8 195 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Tas2r110Q7M712 333 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Orai1Q8BWG9 304 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Yipf4Q8C407 246 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Mrps24Q9CQV5 167 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 2410137M14RikQ9CWF0 162 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Cldn34b2Q9D9N2 209 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Vmn1r65Q9EPS7 332 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Atp6ap1Q9R1Q9 463 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Phf3B2RQG2 2025 aaKnown RBP15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Igkv10-94A0A075B5L1 115 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Olfr1076A2AK60 313 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 CerklA2AQH1 525 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 P01631 113 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Slc12a3P59158 1002 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Fam109bQ14B98 259 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 MlipQ5FW52 269 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Dio1Q61153 257 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Mfsd4aQ6PDC8 510 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Cox14Q8BH51 57 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Gpr26Q8BZA7 337 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Znf628Q8CJ78 1038 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Znf668Q8K2R5 619 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Slc10a6Q9CXB2 373 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Sppl2aQ9JJF9 523 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Mup6A2AV72 179 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Vmn2r115E9Q0E7 857 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Klf9O35739 244 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Nr2f1Q60632 422 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Glt8d2Q640P4 349 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Olfr697Q8VFM4 317 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Sntg1Q925E1 517 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Tpd52l2Q9CYZ2 220 aaKnown RBP15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Q9D937 123 aaKnown RBP15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Emc7Q9EP72 241 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Gmeb1Q9JL60 562 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Exo1Q9QZ11 837 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Dock3Q8CIQ7 2027 aa15.8■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Lrrc72A0A1Y7VMI0 288 aa15.79■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Cdh18E9Q9Q6 790 aa15.79■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Gm14139F6ZS36 494 aa15.79■□□□□ 0.12
Ctcf-201ENSMUST00000005841 St3gal3P97325 374 aa15.79■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Gm8332Q3UTA4 144 aa15.79■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Slc22a13Q6A4L0 551 aa15.79■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Mgat4bQ812F8 548 aa15.79■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Fbxw19Q8C2W8 466 aa15.79■□□□□ 0.12
Ctcf-201ENSMUST00000005841 TapbplQ8VD31 451 aa15.79■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Olfr272Q8VGA0 319 aa15.79■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Slco1a6Q99J94 670 aa15.79■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Exo5Q9CXP9 373 aa15.79■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Abcb10Q9JI39 715 aa15.79■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Nr4a3Q9QZB6 627 aa15.79■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Mpeg1A1L314 713 aa15.79■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms