RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Gpr146Q99LE2 333 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Nkiras2Q9CR56 191 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Zbtb8aQ9CWH1 434 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Capns2Q9D7J7 247 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 1700086D15RikQ9D9E9 151 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ccl27Q9Z1X0 120 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Fam217bA2AJW5 387 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Rnf39A2RT81 352 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Hoxd12P23812 268 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Six5P70178 719 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ssuh2Q8C3L1 340 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Q8C5S3 137 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Q8R3C1 574 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr669Q8VGU9 317 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr668Q8VGW3 318 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 D6Wsu163eQ91YN0 552 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 NsdhlQ9R1J0 362 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr1366A0A1W2P740 328 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 ChadlE9Q7T7 748 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 IlkO55222 452 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Wnt4P22724 351 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Kcnn3P58391 732 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Dcst1Q059Y8 732 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Mansc4Q3UU94 337 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Rbm38Q62176 237 aaKnown RBP15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Pou4f3Q63955 338 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Aldh3b1Q80VQ0 468 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Unc119bQ8C4B4 251 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Slc22a12Q8CFZ5 553 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Clrn1Q8K445 232 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ahsa2Q8N9S3 331 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 MrgprhQ99MT8 321 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Mrps33Q9D2R8 106 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Slc9a3r2Q9JHL1 337 aa15.22■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr1032A2ATE5 310 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gm7951E9Q0A2 213 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 PtprhE9Q0N2 971 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gm6482F6YHC1 213 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gm17124F6ZIG1 213 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Cldn4O35054 210 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 TrhrP21761 393 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Hsd3b2P26149 373 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 MatkP41242 505 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Nr2f6P43136 390 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Rnf223Q3UV31 285 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Zdhhc20Q5Y5T1 380 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Slc30a1Q60738 503 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Supv3l1Q80YD1 779 aaKnown RBP15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Atg4bQ8BGE6 393 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Vmn1r32Q8R2D9 302 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr161Q8VGB9 313 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Lims1Q99JW4 325 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Fzd2Q9JIP6 570 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Tyw5A2RSX7 315 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ssxa1B1AUS7 101 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 MbpP04370 250 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Fads2p1Q0VAX3 487 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Vdac3Q60931 283 aaKnown RBP15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ostf1Q62422 215 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ugt8Q64676 541 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Alkbh2Q6P6J4 239 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Dlec1Q8BLA1 635 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Rad51ap1Q8C551 337 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Teddm1bQ8CC62 306 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr583Q8VG25 319 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Taldo1Q93092 337 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Aldh9a1Q9JLJ2 494 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Asb3Q9WV72 525 aa15.21■□□□□ 0.03
Trim28-201ENSMUST00000005705 Heatr5bQ8C547 2070 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Chd7A2AJK6 2986 aaKnown RBP15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Pcdhgb8A0A140LI48 931 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr1095A3KPP7 308 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tcte1A6H639 498 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Vmn2r113E9PZA6 856 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Vmn2r109K7N747 858 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Cdk5r2O35926 369 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Nr4a1P12813 601 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Pcbp3P57722 371 aaKnown RBP15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 C1qaP98086 245 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Arntl2Q2VPD4 579 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tmem38aQ3TMP8 298 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Nlrc3Q5DU56 1064 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Pabpc2Q62029 628 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tas2r110Q7M712 333 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr1140Q7TR39 311 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr857Q7TRF7 309 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 ExogQ8C163 368 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Fahd1Q8R0F8 227 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Etv3Q8R4Z4 513 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 NoboxQ8VIH1 527 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Uxs1Q91XL3 420 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Ppil1Q9D0W5 166 aa15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Mrpl19Q9D338 292 aaKnown RBP15.21■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr1315-ps1A0A140LI66 314 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Slc37a4A0A1L1SUI3 450 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Zfp472B0V2W5 534 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Vmn2r52L7N2B2 852 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 GypaP14220 168 aa15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Prdx1P35700 199 aaKnown RBP15.2■□□□□ 0.02
Trim28-201ENSMUST00000005705 Hsf2P38533 535 aa15.2■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 56.9 ms