RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 APBB3O95704 486 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 FBLP22087 321 aaKnown RBP13.54□□□□□ -0.24
SCARB2-216ENST00000639300 PSMB10P40306 273 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 ARF3P61204 181 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-216ENST00000639300 HNRNPKP61978 463 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCARB2-216ENST00000639300 CCDC36Q8IYA8 594 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 ZNF619Q8N2I2 560 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 TOE1Q96GM8 510 aaKnown RBP13.54□□□□□ -0.24
SCARB2-216ENST00000639300 RDH8Q9NYR8 311 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 ENTPD2Q9Y5L3 495 aa13.54□□□□□ -0.24
SCARB2-216ENST00000639300 A0A1W2PQ09 198 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 FZD6O60353 706 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 DNASE1P24855 282 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 LRIF1Q5T3J3 769 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 PARP16Q8N5Y8 322 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 GDPD1Q8N9F7 314 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 OR52R1Q8NGF1 315 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 ATG5Q9H1Y0 275 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 NUDT15Q9NV35 164 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 ZNF225Q9UK10 706 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 BAIAP2Q9UQB8 552 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 A8MVJ9 347 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 PRKYO43930 277 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 S100GP29377 79 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 RORAP35398 523 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 RAB40BQ12829 278 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 TRAM1Q15629 374 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 KCTD9Q7L273 389 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 ADIPOR2Q86V24 386 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 OR2T4Q8NH00 348 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 ADOQ96SZ5 270 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 PLEKHA6Q9Y2H5 1048 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 POLR2AP24928 1970 aaKnown RBP13.53□□□□□ -0.24
SCARB2-216ENST00000639300 LINC01553A4QN01 128 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 OR2AT4A6NND4 320 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 KIAA0355O15063 1070 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 KLK8O60259 260 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 GPR75O95800 540 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 PGCP20142 388 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 LIPAP38571 399 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 MAGEA8P43361 318 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 XCR1P46094 333 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 ACTA2P62736 377 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 ERVK-25P63136 954 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 ACTG2P63267 376 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 DEFB133Q30KQ1 61 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 ADPRMQ3LIE5 342 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 WDR45BQ5MNZ6 344 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 CARD17Q5XLA6 110 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 GLT8D1Q68CQ7 371 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 FAM71E1Q6IPT2 247 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 MCATQ8IVS2 390 aaKnown RBP13.53□□□□□ -0.24
SCARB2-216ENST00000639300 SERPINA12Q8IW75 414 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 MED20Q9H944 212 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 VNN3Q9NY84 501 aa13.53□□□□□ -0.24
SCARB2-216ENST00000639300 ANKRD28O15084 1053 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 LYRM1O43325 122 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 PRAMEF2O60811 474 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 CSTBP04080 98 aaKnown RBP13.52□□□□□ -0.24
SCARB2-216ENST00000639300 H2BFMP0C1H6 154 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 LCN1P31025 176 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 CCR2P41597 374 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 SLC6A12P48065 614 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 TRA2BP62995 288 aaKnown RBP13.52□□□□□ -0.24
SCARB2-216ENST00000639300 CSNK1G2P78368 415 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 BCL7AQ4VC05 210 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 BCL2L15Q5TBC7 163 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 ALG1LQ6GMV1 187 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 CD300LGQ6UXG3 332 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 OR5T3Q8NGG3 340 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 TRMT10AQ8TBZ6 339 aaKnown RBP13.52□□□□□ -0.24
SCARB2-216ENST00000639300 LYSMD1Q96S90 227 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 AP1M2Q9Y6Q5 423 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 TVP23AA6NH52 213 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 CLDN24A6NM45 220 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 DUX1O43812 170 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 CPMP14384 443 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 KCNJ10P78508 379 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 GALK2Q01415 458 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 SGCAQ16586 387 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 CTU2Q2VPK5 515 aaKnown RBP13.52□□□□□ -0.24
SCARB2-216ENST00000639300 SOWAHCQ53LP3 525 aaPredicted RBP13.52□□□□□ -0.24
SCARB2-216ENST00000639300 ZNF283Q8N7M2 679 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 OR5W2Q8NH69 310 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 HAVCR1Q96D42 359 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 HHIPQ96QV1 700 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 SCML1Q9UN30 329 aa13.52□□□□□ -0.24
SCARB2-216ENST00000639300 SPAG17Q6Q759 2223 aa13.52□□□□□ -0.25
SCARB2-216ENST00000639300 C17orf105B2RV13 164 aa13.52□□□□□ -0.25
SCARB2-216ENST00000639300 GPR89AB7ZAQ6 455 aa13.52□□□□□ -0.25
SCARB2-216ENST00000639300 SEC14L2O76054 403 aa13.52□□□□□ -0.25
SCARB2-216ENST00000639300 CYB5AP00167 134 aa13.52□□□□□ -0.25
SCARB2-216ENST00000639300 GPR89BP0CG08 455 aa13.52□□□□□ -0.25
SCARB2-216ENST00000639300 ANXA3P12429 323 aa13.52□□□□□ -0.25
SCARB2-216ENST00000639300 CCNOP22674 350 aa13.52□□□□□ -0.25
SCARB2-216ENST00000639300 PRKXP51817 358 aa13.52□□□□□ -0.25
SCARB2-216ENST00000639300 MRPL2Q5T653 305 aaKnown RBP13.52□□□□□ -0.25
SCARB2-216ENST00000639300 KDM4DQ6B0I6 523 aa13.52□□□□□ -0.25
SCARB2-216ENST00000639300 IQCF2Q8IXL9 164 aa13.52□□□□□ -0.25
SCARB2-216ENST00000639300 MR1Q95460 341 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms