RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 NDC1Q9BTX1 674 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 S1PR5Q9H228 398 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 MMP28Q9H239 520 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 PIGUQ9H490 435 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 WASH6PQ9NQA3 447 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 MARK1Q9P0L2 795 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 REV1Q9UBZ9 1251 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 NUFIP1Q9UHK0 495 aaKnown RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 FBXW2Q9UKT8 454 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TMPRSS11EQ9UL52 423 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 BAIAP2Q9UQB8 552 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 CDH10Q9Y6N8 788 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 SESN1Q9Y6P5 492 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 MAU2Q9Y6X3 613 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 A0A1B0GVI7 797 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 DAPL1A0PJW8 107 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 A8MU76 341 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ISM1B1AKI9 464 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 SGK494L7N484 410 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 BTN3A3O00478 584 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TGM5O43548 720 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ARL6IP5O75915 188 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 SOX30O94993 753 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 IFNA7P01567 189 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 CSF2P04141 144 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 CSF3P09919 207 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ALAS2P22557 587 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 FPR3P25089 353 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 LTBRP36941 435 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 FEN1P39748 380 aaKnown RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 GABREP78334 506 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 DPTQ07507 201 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 FAPQ12884 760 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 PIN1Q13526 163 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ELAVL3Q14576 367 aaKnown RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 DECR1Q16698 335 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TATDN3Q17R31 274 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 POM121L1PQ3SYA9 428 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 CCSMST1Q4G0I0 132 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 IDNKQ5T6J7 187 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 PYHIN1Q6K0P9 492 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 PARS2Q7L3T8 475 aaKnown RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ZNF438Q7Z4V0 828 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 GLRX5Q86SX6 157 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TRIM48Q8IWZ4 208 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 SLC43A2Q8N370 569 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 IQCF1Q8N6M8 205 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ACBD7Q8N6N7 88 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ANGPTL6Q8NI99 470 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 CYB5D2Q8WUJ1 264 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ACOT11Q8WXI4 607 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 GATAD2BQ8WXI9 593 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ST6GAL2Q96JF0 529 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 COQ10AQ96MF6 247 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TMED9Q9BVK6 235 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 SLC46A2Q9BY10 475 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 SPRTNQ9H040 489 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 SAP130Q9H0E3 1048 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 EXTL2Q9UBQ6 330 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 CLEC2DQ9UHP7 191 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 C2orf16Q68DN1 1984 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 A0A1W2PQ72 361 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TMEM202A6NGA9 273 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 SLC22A31A6NKX4 558 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 OR5K4A6NMS3 321 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 A8MV72 311 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 KDM4EB2RXH2 506 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 PRR23D1E9PI22 279 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 M0R3H8 397 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 HMGN4O00479 90 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 PDCD5O14737 125 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 PLOD3O60568 738 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 REM1O75628 298 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 PRR23D2P0DMB1 279 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ANXA3P12429 323 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 PRG2P13727 222 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 CELP19835 753 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 CD82P27701 267 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 HTR1FP30939 366 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 RCVRNP35243 200 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 SLC1A3P43003 542 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 TSFMP43897 325 aaKnown RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 RNF144AP50876 292 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 LIM2P55344 173 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 RRAS2P62070 204 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 RPS25P62851 125 aaKnown RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 RAC1P63000 192 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 CDK5Q00535 292 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 CHRNEQ04844 493 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 PGGHGQ32M88 737 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 FAM214AQ32MH5 1076 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 UAP1L1Q3KQV9 507 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 GLYR1Q49A26 553 aaPredicted RBP3.73□□□□□ -1.81
SCN1A-214ENST00000637038 LYSMD4Q5XG99 296 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 KIAA1161Q6NSJ0 714 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 ADAMTSL4Q6UY14 1074 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 PRICKLE2Q7Z3G6 844 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 LIX1LQ8IVB5 337 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 NLGN4XQ8N0W4 816 aa3.73□□□□□ -1.81
SCN1A-214ENST00000637038 SLC44A3Q8N4M1 653 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms