RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 PPP1R7Q15435 360 aa16■□□□□ 0.15
CLN6-212ENST00000636020 ZKSCAN8Q15776 578 aaPredicted RBP16■□□□□ 0.15
CLN6-212ENST00000636020 ZNF239Q16600 458 aaKnown RBP16■□□□□ 0.15
CLN6-212ENST00000636020 CYP27C1Q4G0S4 372 aa16■□□□□ 0.15
CLN6-212ENST00000636020 PDSS1Q5T2R2 415 aa16■□□□□ 0.15
CLN6-212ENST00000636020 TMEM108Q6UXF1 575 aa16■□□□□ 0.15
CLN6-212ENST00000636020 ANKMY2Q8IV38 441 aa16■□□□□ 0.15
CLN6-212ENST00000636020 CEP112Q8N8E3 955 aa16■□□□□ 0.15
CLN6-212ENST00000636020 OR2W6PQ8NHA6 318 aa16■□□□□ 0.15
CLN6-212ENST00000636020 ZNF696Q9H7X3 374 aa16■□□□□ 0.15
CLN6-212ENST00000636020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16■□□□□ 0.15
CLN6-212ENST00000636020 PMF1-BGLAPU3KQ54 211 aa16■□□□□ 0.15
CLN6-212ENST00000636020 CMYA5Q8N3K9 4069 aa16■□□□□ 0.15
CLN6-212ENST00000636020 A0A087WZY1 265 aa15.99■□□□□ 0.15
CLN6-212ENST00000636020 PGM3O95394 542 aa15.99■□□□□ 0.15
CLN6-212ENST00000636020 CREB1P16220 341 aa15.99■□□□□ 0.15
CLN6-212ENST00000636020 PTAFRP25105 342 aa15.99■□□□□ 0.15
CLN6-212ENST00000636020 IVDP26440 423 aa15.99■□□□□ 0.15
CLN6-212ENST00000636020 CSTF3Q12996 717 aaKnown RBP15.99■□□□□ 0.15
CLN6-212ENST00000636020 IQCCQ4KMZ1 466 aa15.99■□□□□ 0.15
CLN6-212ENST00000636020 APOOLQ6UXV4 268 aa15.99■□□□□ 0.15
CLN6-212ENST00000636020 COMMD6Q7Z4G1 85 aa15.99■□□□□ 0.15
CLN6-212ENST00000636020 P2RY8Q86VZ1 359 aa15.99■□□□□ 0.15
CLN6-212ENST00000636020 OR9A2Q8NGT5 310 aa15.99■□□□□ 0.15
CLN6-212ENST00000636020 REXO5Q96IC2 774 aaKnown RBP15.99■□□□□ 0.15
CLN6-212ENST00000636020 GPR22Q99680 433 aa15.99■□□□□ 0.15
CLN6-212ENST00000636020 TMEM185BQ9H7F4 350 aa15.99■□□□□ 0.15
CLN6-212ENST00000636020 IPPKQ9H8X2 491 aa15.99■□□□□ 0.15
CLN6-212ENST00000636020 LOC390937A0A1W2PQ73 354 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 C7orf72A4D263 438 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 PLOD3O60568 738 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 ANGPTL1O95841 491 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 YES1P07947 543 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 GGT1P19440 569 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 CD40P25942 277 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 ALDH9A1P49189 494 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 FNTAP49354 379 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 RAB10P61026 200 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 SH2D4BQ5SQS7 431 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 CPTPQ5TA50 214 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 SPC24Q8NBT2 197 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 KCTD4Q8WVF5 259 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 RNF145Q96MT1 663 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 NMRAL1Q9HBL8 299 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 TAS2R9Q9NYW1 312 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 PRSS50Q9UI38 385 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 UTS2RQ9UKP6 389 aa15.98■□□□□ 0.15
CLN6-212ENST00000636020 OR5H1A6NKK0 313 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 NDUFB5O43674 189 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 PRKD3O94806 890 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 CLDN9O95484 217 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 IL33O95760 270 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 ME2P23368 584 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 OR3A2P47893 321 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 PRR5P85299 388 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 GALNT1Q10472 559 aaPredicted RBP15.97■□□□□ 0.15
CLN6-212ENST00000636020 GTF2H2Q13888 395 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 PDCD2Q16342 344 aaPredicted RBP15.97■□□□□ 0.15
CLN6-212ENST00000636020 DECR1Q16698 335 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 FRG2Q64ET8 278 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 GTF2H2CQ6P1K8 395 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 DEF8Q6ZN54 512 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 GOLGA7Q7Z5G4 137 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 OR7G2Q8NG99 324 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 FAM216AQ8WUB2 273 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 ZBTB8AQ96BR9 441 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 MTBPQ96DY7 904 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 KLHL15Q96M94 604 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 FRG2BQ96QU4 278 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 INPP5KQ9BT40 448 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 FAIM2Q9BWQ8 316 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 SRXN1Q9BYN0 137 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 TBL1XR1Q9BZK7 514 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 BPESC1Q9GZL8 116 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 PFDN4Q9NQP4 134 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 FKBP7Q9Y680 259 aa15.97■□□□□ 0.15
CLN6-212ENST00000636020 HEATR1Q9H583 2144 aaKnown RBP15.97■□□□□ 0.15
CLN6-212ENST00000636020 NOTCH1P46531 2555 aa15.96■□□□□ 0.15
CLN6-212ENST00000636020 A0A1W2PRB8 838 aa15.96■□□□□ 0.15
CLN6-212ENST00000636020 TMPRSS2O15393 492 aa15.96■□□□□ 0.15
CLN6-212ENST00000636020 LTA4HP09960 611 aaKnown RBP15.96■□□□□ 0.15
CLN6-212ENST00000636020 COX5AP20674 150 aa15.96■□□□□ 0.15
CLN6-212ENST00000636020 IGHV1-2P23083 117 aa15.96■□□□□ 0.15
CLN6-212ENST00000636020 SHC1P29353 583 aa15.96■□□□□ 0.15
CLN6-212ENST00000636020 ZNF83P51522 516 aa15.96■□□□□ 0.15
CLN6-212ENST00000636020 FASTKD3Q14CZ7 662 aaKnown RBP15.96■□□□□ 0.15
CLN6-212ENST00000636020 MORF4L2Q15014 288 aa15.96■□□□□ 0.15
CLN6-212ENST00000636020 ACAP2Q15057 778 aa15.96■□□□□ 0.15
CLN6-212ENST00000636020 CARTPTQ16568 116 aa15.96■□□□□ 0.15
CLN6-212ENST00000636020 TRIM58Q8NG06 486 aa15.96■□□□□ 0.15
CLN6-212ENST00000636020 FAM110BQ8TC76 370 aa15.96■□□□□ 0.15
CLN6-212ENST00000636020 SLC9A6Q92581 669 aa15.96■□□□□ 0.15
CLN6-212ENST00000636020 CPNE4Q96A23 557 aaPredicted RBP15.96■□□□□ 0.15
CLN6-212ENST00000636020 SORCS2Q96PQ0 1159 aa15.96■□□□□ 0.15
CLN6-212ENST00000636020 CDK15Q96Q40 435 aa15.96■□□□□ 0.15
CLN6-212ENST00000636020 MED17Q9NVC6 651 aa15.96■□□□□ 0.15
CLN6-212ENST00000636020 LRP5LA4QPB2 252 aa15.95■□□□□ 0.14
CLN6-212ENST00000636020 CXorf49A8MYA2 514 aaPredicted RBP15.95■□□□□ 0.14
CLN6-212ENST00000636020 UTS2O95399 124 aa15.95■□□□□ 0.14
CLN6-212ENST00000636020 EDNRAP25101 427 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms