RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 DFFBO76075 338 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 CD160O95971 181 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 RAF1P04049 648 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 YES1P07947 543 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 HMBSP08397 361 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 PAEPP09466 180 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 FRMD6-AS1P0C7T7 363 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 RALAP11233 206 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 GOT1P17174 413 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 CMA1P23946 247 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 ALDH4A1P30038 563 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 RDXP35241 583 aaKnown RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 NUDT1P36639 197 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 CDKN1AP38936 164 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 DCTP40126 519 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 GCLMP48507 274 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 STK19P49842 368 aaPredicted RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 TKTL1P51854 596 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 NDUFA8P51970 172 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 SMSP52788 366 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 UCNP55089 124 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 CLDN17P56750 224 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 ERVPABLB-1P60509 514 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 RPS24P62847 133 aaKnown RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 RPP38P78345 283 aaKnown RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 GCNT1Q02742 428 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 SLC3A1Q07837 685 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 LCP2Q13094 533 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 TRA2AQ13595 282 aaKnown RBP eCLIP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 CUL2Q13617 745 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 PDK1Q15118 436 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 ACKR1Q16570 336 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 GOLGA7BQ2TAP0 167 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 ACCSLQ4AC99 568 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 MPPE1Q53F39 396 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 TECRLQ5HYJ1 363 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 MS4A13Q5J8X5 152 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 TPRG1LQ5T0D9 272 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 ATL3Q6DD88 541 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 UGT3A1Q6NUS8 523 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 ADAM5Q6NVV9 412 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 PMF1Q6P1K2 205 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 RFWD3Q6PCD5 774 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 CD164L2Q6UWJ8 174 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 ZNF771Q7L3S4 317 aaPredicted RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 MYPOPQ86VE0 399 aaPredicted RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 KRTAP7-1Q8IUC3 87 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 KLHDC1Q8N7A1 406 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 TMEM99Q8N816 258 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 ZNF557Q8N988 423 aaPredicted RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 LMNTD1Q8N9Z9 388 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 FBXL13Q8NEE6 735 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 ANKRD20A12PQ8NF67 263 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 NEK11Q8NG66 645 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 OR7A2PQ8NGA2 310 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 OR13C3Q8NGS6 347 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 DQX1Q8TE96 717 aaKnown RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 SETD7Q8WTS6 366 aaKnown RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 DDI1Q8WTU0 396 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 METTL21AQ8WXB1 218 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 PIK3R3Q92569 461 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 FGF11Q92914 225 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 NT5C3BQ969T7 300 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 TMEM186Q96B77 213 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 PAGE5Q96GU1 130 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 RBM41Q96IZ5 413 aaKnown RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 C4orf45Q96LM5 186 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 ZNF578Q96N58 590 aaPredicted RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 ZNF583Q96ND8 569 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 FAM111AQ96PZ2 611 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 BTBD9Q96Q07 612 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 PSMB7Q99436 277 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 KLF6Q99612 283 aaPredicted RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 PKP2Q99959 881 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 DDX50Q9BQ39 737 aaKnown RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 RHNO1Q9BSD3 238 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 MED10Q9BTT4 135 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 XPO4Q9C0E2 1151 aaKnown RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 SLC39A8Q9C0K1 460 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 NACA2Q9H009 215 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 SHARPINQ9H0F6 387 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 NEUROG2Q9H2A3 272 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 RNF121Q9H920 327 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 UPF2Q9HAU5 1272 aaKnown RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 SYTL2Q9HCH5 934 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 GDF3Q9NR23 364 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 STARD5Q9NSY2 213 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 HPF1Q9NWY4 346 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 RAB20Q9NX57 234 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 FBXL12Q9NXK8 326 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 IL36AQ9UHA7 158 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 UBQLN2Q9UHD9 624 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 SLC12A6Q9UHW9 1150 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 FAF1Q9UNN5 650 aaPredicted RBP2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 ERVW-1Q9UQF0 538 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 MTORP42345 2549 aa2.18□□□□□ -2.06
SMARCB1-208ENST00000634926 PCM1Q15154 2024 aa2.17□□□□□ -2.06
SMARCB1-208ENST00000634926 FBN3Q75N90 2809 aa2.17□□□□□ -2.06
SMARCB1-208ENST00000634926 IGHV4-61A0A0C4DH41 118 aa2.17□□□□□ -2.06
SMARCB1-208ENST00000634926 SPTY2D1-AS1A0A0U1RR47 76 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms