RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 A4GNTQ9UNA3 340 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 CDC14AQ9UNH5 594 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 DSPPQ9NZW4 1301 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 UNC80Q8N2C7 3258 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 TRBV4-1A0A0J9YWV2 114 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 TCRBV16S1A1N1A0A5B0 115 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 SH3PXD2BA1X283 911 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 EFCAB10A6NFE3 127 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 LMO7DNF2Z398 122 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 FAM227AF5H4B4 570 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 CYR61O00622 381 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 AQP9O43315 295 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 NME6O75414 186 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-230ENST00000634433 WBP4O75554 376 aaKnown RBP6.67□□□□□ -1.34
BRCA1-230ENST00000634433 WNT1P04628 370 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 HTR1AP08908 422 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 CCNYL3P0C7X3 344 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 SLC35E2P0CK97 266 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 RNH1P13489 461 aaKnown RBP6.67□□□□□ -1.34
BRCA1-230ENST00000634433 ST6GAL1P15907 406 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 NT5EP21589 574 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 SDHBP21912 280 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 CAPZBP47756 277 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 IDH2P48735 452 aaKnown RBP6.67□□□□□ -1.34
BRCA1-230ENST00000634433 MAZP56270 477 aaKnown RBP6.67□□□□□ -1.34
BRCA1-230ENST00000634433 CARD18P57730 90 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 EMX1Q04741 257 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-230ENST00000634433 CHRNEQ04844 493 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 FUT5Q11128 374 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 BIKQ13323 160 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 PTGES3Q15185 160 aaKnown RBP6.67□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF628Q5EBL2 1059 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 TCTE1Q5JU00 501 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 FDX2Q6P4F2 183 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 C11orf88Q6PI97 169 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 OGFOD3Q6PK18 319 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 KLHL17Q6TDP4 642 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 PTCHD4Q6ZW05 846 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF438Q7Z4V0 828 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 UBALD2Q8IYN6 164 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 DNAJC22Q8N4W6 341 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 FRMD1Q8N878 549 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 OR10H5Q8NGA6 315 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 OR52P1PQ8NH57 321 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 SLC9A6Q92581 669 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 CSF3RQ99062 836 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 COPS4Q9BT78 406 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 POLR2J2Q9GZM3 115 aaKnown RBP6.67□□□□□ -1.34
BRCA1-230ENST00000634433 CHRNA10Q9GZZ6 450 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 POLR2J3Q9H1A7 115 aaKnown RBP6.67□□□□□ -1.34
BRCA1-230ENST00000634433 MIR1-1HGQ9H1L0 117 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 POLE3Q9NRF9 147 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 DUSP22Q9NRW4 184 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 SNTG1Q9NSN8 517 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 PSORS1C1Q9UIG5 152 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 TUBD1Q9UJT1 453 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 PLCL2Q9UPR0 1127 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 SATB2Q9UPW6 733 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 WDR45Q9Y484 360 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 CCDC88CQ9P219 2028 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 SLC9B1P1A6NJY1 282 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 CLCA1A8K7I4 914 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 CLDN4O14493 209 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 RRP8O43159 456 aaKnown RBP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 MT-ND2P03891 347 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 THBS1P07996 1170 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 POU2F1P14859 743 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 CHMP24386 653 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 ABCD3P28288 659 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 GPR3P46089 330 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 C21orf59P57076 290 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 TAS2R41P59536 307 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 ST3GAL3Q11203 375 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 TARDBPQ13148 414 aaKnown RBP eCLIP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 FAM53BQ14153 422 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 TRAM2Q15035 370 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 PDCD1Q15116 288 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 PRTGQ2VWP7 1150 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 SYT6Q5T7P8 510 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 PEAR1Q5VY43 1037 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 PODNL1Q6PEZ8 512 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 RRM2BQ7LG56 351 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 C17orf82Q86X59 251 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF761Q86XN6 746 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 RBM45Q8IUH3 476 aaKnown RBP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 GRAMD2AQ8IUY3 354 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 CCDC71Q8IV32 467 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 OR4N5Q8IXE1 308 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 OR4D11Q8NGI4 311 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 OR6T1Q8NGN1 323 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 C9orf43Q8TAL5 461 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF671Q8TAW3 534 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 GNPDA2Q8TDQ7 276 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 FAR1Q8WVX9 515 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 OTUB1Q96FW1 271 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-230ENST00000634433 ZDHHC12Q96GR4 267 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 CD180Q99467 661 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 FUZQ9BT04 418 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 RAB33BQ9H082 229 aa6.66□□□□□ -1.34
BRCA1-230ENST00000634433 KRCC1Q9NPI7 259 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms