RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 KCNE5Q9UJ90 142 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 TP53TG5Q9Y2B4 290 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 CSAG2Q9Y5P2 127 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 ATMQ13315 3056 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 PTPRQQ9UMZ3 2332 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 NBEAQ8NFP9 2946 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 CENPVL1A0A0U1RR11 272 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 PRAMEF25A6NGN4 478 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 AGAP5A6NIR3 686 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 K7EM74 188 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 M0QX08 132 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 ARPC2O15144 300 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 SCO2O43819 266 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 FADS1O60427 444 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 GCM2O75603 506 aaPredicted RBP7.8□□□□□ -1.16
SGMS1-211ENST00000626236 SERPINB7O75635 380 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 PDE9AO76083 593 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 OPN1SWP03999 348 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 DBIP07108 87 aaKnown RBP7.8□□□□□ -1.16
SGMS1-211ENST00000626236 PABPC4LP0CB38 370 aaKnown RBP7.8□□□□□ -1.16
SGMS1-211ENST00000626236 ETS2P15036 469 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 IL7RP16871 459 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 TBXA2RP21731 343 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 KDELR2P33947 212 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 CASP3P42574 277 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 CD97P48960 835 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 CLK3P49761 638 aaKnown RBP7.8□□□□□ -1.16
SGMS1-211ENST00000626236 TNFSF10P50591 281 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 PCBP3P57721 371 aaKnown RBP7.8□□□□□ -1.16
SGMS1-211ENST00000626236 GPR85P60893 370 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 RHDQ02161 417 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 BNIP2Q12982 314 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 ZNF141Q15928 474 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 ZNF766Q5HY98 468 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 ZNF311Q5JNZ3 666 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 SLC22A10Q63ZE4 541 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 GLYATQ6IB77 296 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 IGFL3Q6UXB1 125 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 ASB18Q6ZVZ8 466 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 PATL1Q86TB9 770 aaKnown RBP7.8□□□□□ -1.16
SGMS1-211ENST00000626236 MARCH3Q86UD3 253 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 VRK2Q86Y07 508 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 ARMC8Q8IUR7 673 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 PEX5LQ8IYB4 626 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 GATSQ8NAP1 163 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 POGLUT1Q8NBL1 392 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 PSD4Q8NDX1 1056 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 MDS2Q8NDY4 140 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 OR52P1PQ8NH57 321 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 C9orf43Q8TAL5 461 aaPredicted RBP7.8□□□□□ -1.16
SGMS1-211ENST00000626236 SLC26A7Q8TE54 656 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 PAQR8Q8TEZ7 354 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 WDR60Q8WVS4 1066 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 PMM1Q92871 262 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 FAM162AQ96A26 154 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 SECISBP2Q96T21 854 aaKnown RBP7.8□□□□□ -1.16
SGMS1-211ENST00000626236 SPATA5L1Q9BVQ7 753 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 OSBPL11Q9BXB4 747 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 HES7Q9BYE0 225 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 MMADHCQ9H3L0 296 aaPredicted RBP7.8□□□□□ -1.16
SGMS1-211ENST00000626236 GALNT9Q9HCQ5 603 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 ZNF71Q9NQZ8 489 aaPredicted RBP7.8□□□□□ -1.16
SGMS1-211ENST00000626236 KLHL1Q9NR64 748 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 SACM1LQ9NTJ5 587 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 CNIH4Q9P003 139 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 SUCOQ9UBS9 1254 aaKnown RBP7.8□□□□□ -1.16
SGMS1-211ENST00000626236 SEC14L3Q9UDX4 400 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 MAGEL2Q9UJ55 1249 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 CNOT11Q9UKZ1 510 aaKnown RBP7.8□□□□□ -1.16
SGMS1-211ENST00000626236 ABCG2Q9UNQ0 655 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 DTNAQ9Y4J8 743 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 PCDHGB7Q9Y5F8 929 aa7.8□□□□□ -1.16
SGMS1-211ENST00000626236 GPC6Q9Y625 555 aaPredicted RBP7.8□□□□□ -1.16
SGMS1-211ENST00000626236 A0A0G2JMM0 328 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 A0A1W2PPB8 328 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 A0A1W2PRS3 328 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 CLDN24A6NM45 220 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 C17orf51A8MQB3 221 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 KIR3DP1A8MWS1 328 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 NPIPB9F8W1W9 429 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 H3BNH8 94 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 NDUFB5O43674 189 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 RRP9O43818 475 aaKnown RBP7.79□□□□□ -1.16
SGMS1-211ENST00000626236 NME2P1O60361 137 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 DPM1O60762 260 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 STAMBPO95630 424 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 ZNF682O95780 498 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 ANGPTL1O95841 491 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 SERPINA1P01009 418 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 SP1P08047 785 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 NGFRP08138 427 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 RPS4Y1P22090 263 aaKnown RBP7.79□□□□□ -1.16
SGMS1-211ENST00000626236 NME2P22392 152 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 PTGDSP41222 190 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 CRYBA2P53672 197 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 KCNJ2P63252 427 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 DMTNQ08495 405 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 SNTA1Q13424 505 aa7.79□□□□□ -1.16
SGMS1-211ENST00000626236 TRIM25Q14258 630 aaKnown RBP7.79□□□□□ -1.16
SGMS1-211ENST00000626236 FGFBP1Q14512 234 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms