RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ARGLU1Q9NWB6 273 aaPredicted RBP20.25■□□□□ 0.83
SF1-220ENST00000626028 MED11Q9P086 117 aa20.25■□□□□ 0.83
SF1-220ENST00000626028 CREBBPQ92793 2442 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 A0A087WZY1 265 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 NKX2-6A6NCS4 301 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 E9PBE3 544 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 SCDO00767 359 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 AK1P00568 194 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 HK1P19367 917 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 ATP6V1C1P21283 382 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 WNT3P56703 355 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 CLDN18P56856 261 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 B3GALT5-AS1P59052 145 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 OR4F3Q6IEY1 312 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 FIGNL1Q6PIW4 674 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 MEX3BQ6ZN04 569 aaKnown RBP20.24■□□□□ 0.83
SF1-220ENST00000626028 TNIP2Q8NFZ5 429 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 FBXO30Q8TB52 745 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 PIWIL2Q8TC59 973 aaKnown RBP20.24■□□□□ 0.83
SF1-220ENST00000626028 MIPOL1Q8TD10 442 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 CDS1Q92903 461 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 MAELQ96JY0 434 aaKnown RBP20.24■□□□□ 0.83
SF1-220ENST00000626028 TRIB1Q96RU8 372 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 YIPF4Q9BSR8 244 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 NPDC1Q9NQX5 325 aaPredicted RBP20.24■□□□□ 0.83
SF1-220ENST00000626028 AIG1Q9NVV5 245 aa20.24■□□□□ 0.83
SF1-220ENST00000626028 FOXD3Q9UJU5 478 aaPredicted RBP20.24■□□□□ 0.83
SF1-220ENST00000626028 C7orf72A4D263 438 aa20.23■□□□□ 0.83
SF1-220ENST00000626028 SCN2BO60939 215 aa20.23■□□□□ 0.83
SF1-220ENST00000626028 AGR2O95994 175 aa20.23■□□□□ 0.83
SF1-220ENST00000626028 PRF1P14222 555 aa20.23■□□□□ 0.83
SF1-220ENST00000626028 ZNF17P17021 662 aa20.23■□□□□ 0.83
SF1-220ENST00000626028 OPRM1P35372 400 aa20.23■□□□□ 0.83
SF1-220ENST00000626028 STX5Q13190 355 aa20.23■□□□□ 0.83
SF1-220ENST00000626028 FBXL19-AS1Q494R0 122 aa20.23■□□□□ 0.83
SF1-220ENST00000626028 HEATR5AQ86XA9 2040 aa20.23■□□□□ 0.83
SF1-220ENST00000626028 LIX1LQ8IVB5 337 aa20.23■□□□□ 0.83
SF1-220ENST00000626028 WDR75Q8IWA0 830 aaKnown RBP20.23■□□□□ 0.83
SF1-220ENST00000626028 DMRTC2Q8IXT2 367 aaPredicted RBP20.23■□□□□ 0.83
SF1-220ENST00000626028 GLB1L3Q8NCI6 653 aaPredicted RBP20.23■□□□□ 0.83
SF1-220ENST00000626028 NUDT8Q8WV74 236 aa20.23■□□□□ 0.83
SF1-220ENST00000626028 OIT3Q8WWZ8 545 aa20.23■□□□□ 0.83
SF1-220ENST00000626028 CHMP6Q96FZ7 201 aa20.23■□□□□ 0.83
SF1-220ENST00000626028 ATP6V1G3Q96LB4 118 aa20.23■□□□□ 0.83
SF1-220ENST00000626028 TUBA1CQ9BQE3 449 aa20.23■□□□□ 0.83
SF1-220ENST00000626028 VIPAS39Q9H9C1 493 aa20.23■□□□□ 0.83
SF1-220ENST00000626028 RPH3AQ9Y2J0 694 aaPredicted RBP20.23■□□□□ 0.83
SF1-220ENST00000626028 ANKHD1Q8IWZ3 2542 aaKnown RBP20.23■□□□□ 0.83
SF1-220ENST00000626028 FBN2P35556 2912 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 SYT5O00445 386 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 RCBTB2O95199 551 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 GUSBP08236 651 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 IDO1P14902 403 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 UQCRC2P22695 453 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 CTSSP25774 331 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 TXNL4AP83876 142 aaKnown RBP20.22■□□□□ 0.83
SF1-220ENST00000626028 TMEM44Q2T9K0 475 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 DCST2Q5T1A1 773 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 RAET1LQ5VY80 246 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 HDXQ7Z353 690 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 MEIOBQ8N635 442 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 ZBTB8AQ96BR9 441 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 CLCF1Q9UBD9 225 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 BTNL2Q9UIR0 455 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 GPR45Q9Y5Y3 372 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 AP4B1Q9Y6B7 739 aa20.22■□□□□ 0.83
SF1-220ENST00000626028 RNF103-CHMP3A0A140T963 221 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 H3BNH8 94 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 HCRTR2O43614 444 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 ALDOCP09972 364 aaKnown RBP20.21■□□□□ 0.83
SF1-220ENST00000626028 S100A3P33764 101 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 SOAT1P35610 550 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 ASCL1P50553 236 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 FAM174BQ3ZCQ3 159 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 KLHL26Q53HC5 615 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 AP1ARQ63HQ0 302 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 CHMP1BQ7LBR1 199 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 C6orf120Q7Z4R8 191 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 CLECL1Q8IZS7 167 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 ZNF295-AS1Q8N0V1 137 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 NAXEQ8NCW5 288 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 CHDHQ8NE62 594 aaPredicted RBP20.21■□□□□ 0.83
SF1-220ENST00000626028 OR4A15Q8NGL6 344 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 ZNF75CPQ92670 426 aaPredicted RBP20.21■□□□□ 0.83
SF1-220ENST00000626028 ARL8AQ96BM9 186 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 OR7D2Q96RA2 312 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 FBXO34Q9NWN3 711 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 KCNN3Q9UGI6 736 aa20.21■□□□□ 0.83
SF1-220ENST00000626028 OR2M5A3KFT3 312 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 CLCA1A8K7I4 914 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 CRHP06850 196 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 SNRPB2P08579 225 aaKnown RBP20.2■□□□□ 0.82
SF1-220ENST00000626028 POU3F2P20265 443 aaPredicted RBP20.2■□□□□ 0.82
SF1-220ENST00000626028 MATN1P21941 496 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 BMP5P22003 454 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 EPHA3P29320 983 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 STARP49675 285 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 ZNF136P52737 540 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 ATP12AP54707 1039 aa20.2■□□□□ 0.82
SF1-220ENST00000626028 PHC1P78364 1004 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms