RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 KIR3DP1A8MWS1 328 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 G3V3Y1 287 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 EMC8O43402 210 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 HCN1O60741 890 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 TNFRSF21O75509 655 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 KRT36O76013 467 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 KRT75O95678 551 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 BMP2P12643 396 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 NAGAP17050 411 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 GGT1P19440 569 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 S1PR1P21453 382 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 PIGAP37287 484 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 DNASE1L1P49184 302 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 NR0B1P51843 470 aaKnown RBP11.58□□□□□ -0.56
PNKP-217ENST00000625216 RPP38P78345 283 aaKnown RBP11.58□□□□□ -0.56
PNKP-217ENST00000625216 MGAT2Q10469 447 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 FADDQ13158 208 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 TP53BP2Q13625 1128 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 ADRM1Q16186 407 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 CYP51A1Q16850 503 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 PRICKLE4Q2TBC4 344 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 GXYLT1Q4G148 440 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 FBXW10Q5XX13 1052 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 LCN8Q6JVE9 175 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 CYP2R1Q6VVX0 501 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 TRILQ7L0X0 811 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 SZRD1Q7Z422 152 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 C6orf120Q7Z4R8 191 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 SERPINA11Q86U17 422 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 CD163Q86VB7 1156 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 VWA5B2Q8N398 1253 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 SIMC1Q8NDZ2 872 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 ZNF675Q8TD23 568 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 ADIPOR1Q96A54 375 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 MARVELD3Q96A59 401 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 ELP4Q96EB1 424 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 GIMAP5Q96F15 307 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 MUC13Q9H3R2 512 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 RAD21L1Q9H4I0 556 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 ZFP64Q9NPA5 681 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 TUBA8Q9NY65 449 aaPredicted RBP11.58□□□□□ -0.56
PNKP-217ENST00000625216 ACTR3BQ9P1U1 418 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 MAGEL2Q9UJ55 1249 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 NPFFR2Q9Y5X5 522 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 CHCHD2Q9Y6H1 151 aaPredicted RBP11.58□□□□□ -0.56
PNKP-217ENST00000625216 CRYBG3Q68DQ2 2970 aa11.58□□□□□ -0.56
PNKP-217ENST00000625216 UPK1AO00322 258 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 PLOD2O00469 737 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 AQP7O14520 342 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 ZNHIT1O43257 154 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 NME6O75414 186 aaPredicted RBP11.57□□□□□ -0.56
PNKP-217ENST00000625216 SNX4O95219 450 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 HOXD4P09016 255 aaPredicted RBP11.57□□□□□ -0.56
PNKP-217ENST00000625216 ARAFP10398 606 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 PCGF2P35227 344 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 PTGER4P35408 488 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 CRATP43155 626 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 MAGEA5P43359 124 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 DCAF7P61962 342 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 DUSP8Q13202 625 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 VMACQ2NL98 169 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 GCNT6Q5T4J0 391 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 TNFAIP8L2Q6P589 184 aaPredicted RBP11.57□□□□□ -0.56
PNKP-217ENST00000625216 C3P1Q6ZMU1 363 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 DHFR2Q86XF0 187 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 NUP43Q8NFH3 380 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 OR10G3Q8NGC4 313 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 OR56A1Q8NGH5 318 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 ASB5Q8WWX0 329 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 JADE3Q92613 823 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 MOAP1Q96BY2 351 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 SARAFQ96BY9 339 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 CTHRC1Q96CG8 243 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 OTUB1Q96FW1 271 aaPredicted RBP11.57□□□□□ -0.56
PNKP-217ENST00000625216 DOHHQ9BU89 302 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 SPATA9Q9BWV2 254 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 LDAHQ9H6V9 325 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 PROK2Q9HC23 129 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 ACKR4Q9NPB9 350 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 NTMQ9P121 344 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 B4GALT7Q9UBV7 327 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 PRODH2Q9UF12 536 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 ZNF639Q9UID6 485 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 CNOT11Q9UKZ1 510 aaKnown RBP11.57□□□□□ -0.56
PNKP-217ENST00000625216 HRH3Q9Y5N1 445 aa11.57□□□□□ -0.56
PNKP-217ENST00000625216 TCRBV5S2A0A599 114 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 TCRBV3S1A0A5B6 114 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 FIGNL2A6NMB9 653 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 NPIPA2E9PIF3 369 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 NPIPA3F8WFD2 350 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 CXCR6O00574 342 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 ACOX3O15254 700 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 PSMG1O95456 288 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 ATP6V1G2O95670 118 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 CBX7O95931 251 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 C8BP07358 591 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 IFI6P09912 130 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 GRNP28799 593 aaKnown RBP11.56□□□□□ -0.56
PNKP-217ENST00000625216 MAN2A2P49641 1150 aa11.56□□□□□ -0.56
PNKP-217ENST00000625216 PRKAG1P54619 331 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms