RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 LAMA3Q16787 3333 aa11.68□□□□□ -0.54
LITAF-221ENST00000622633 COL4A6Q14031 1691 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 LILRB5O75023 590 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 CRYBA1P05813 215 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 DNASE1P24855 282 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 KIAA1024LP59773 190 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 NOGQ13253 232 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 GRIN2CQ14957 1233 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 LY6G5CQ5SRR4 150 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 ELP2Q6IA86 826 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 TRIM40Q6P9F5 258 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 DPPA2Q7Z7J5 298 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 ZNF740Q8NDX6 193 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 DENND6BQ8NEG7 585 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 CXorf40BQ96DE9 158 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 MTERF3Q96E29 417 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 RAD9AQ99638 391 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 FAM83CQ9BQN1 747 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 WRAP53Q9BUR4 548 aaKnown RBP11.67□□□□□ -0.54
LITAF-221ENST00000622633 DMRT3Q9NQL9 472 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 ZMIZ1Q9ULJ6 1067 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 DYRK1BQ9Y463 629 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 CFAP20Q9Y6A4 193 aaKnown RBP11.67□□□□□ -0.54
LITAF-221ENST00000622633 TRBC2A0A5B9 178 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 PPM1DO15297 605 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 C1GALT1C1LP0DN25 315 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 LAG3P18627 525 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 G0S2P27469 103 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 XCR1P46094 333 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 TLE2Q04725 743 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 RBBP4Q09028 425 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 OPCMLQ14982 345 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 PTGES3Q15185 160 aaKnown RBP11.67□□□□□ -0.54
LITAF-221ENST00000622633 RNF212Q495C1 297 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 PRAMEF13Q5VWM6 474 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 ATCAYQ86WG3 371 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 ARRDC1Q8N5I2 433 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 C2orf73Q8N5S3 287 aaPredicted RBP11.67□□□□□ -0.54
LITAF-221ENST00000622633 AQP11Q8NBQ7 271 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 COQ8AQ8NI60 647 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 SNX33Q8WV41 574 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 DIRAS2Q96HU8 199 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 DEFB118Q96PH6 123 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 THSD1Q9NS62 852 aa11.67□□□□□ -0.54
LITAF-221ENST00000622633 A0A1W2PRB8 838 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 FAM227AF5H4B4 570 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 UBE2CO00762 179 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 TCAPO15273 167 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 GASTP01350 101 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 ELFN1P0C7U0 828 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 DDX6P26196 483 aaKnown RBP eCLIP11.66□□□□□ -0.54
LITAF-221ENST00000622633 BTG1P62324 171 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 ECH1Q13011 328 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 MAJINQ3KP22 176 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 FAM71E1Q6IPT2 247 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 CNKSR3Q6P9H4 555 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 HAGHLQ6PII5 290 aaPredicted RBP11.66□□□□□ -0.54
LITAF-221ENST00000622633 SLC34A3Q8N130 599 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 ZNF454Q8N9F8 522 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 UXS1Q8NBZ7 420 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 C19orf18Q8NEA5 215 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 GEMIN6Q8WXD5 167 aaKnown RBP11.66□□□□□ -0.54
LITAF-221ENST00000622633 CREB3L1Q96BA8 519 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 MRPL38Q96DV4 380 aaKnown RBP11.66□□□□□ -0.54
LITAF-221ENST00000622633 MS4A3Q96HJ5 214 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 MEGF10Q96KG7 1140 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 RHOVQ96L33 236 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 MRGPRX3Q96LB0 322 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 MCOLN1Q9GZU1 580 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 RIMS4Q9H426 269 aaPredicted RBP11.66□□□□□ -0.54
LITAF-221ENST00000622633 TMEM38AQ9H6F2 299 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.66□□□□□ -0.54
LITAF-221ENST00000622633 IL36AQ9UHA7 158 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 IQCMA0A1B0GVH7 501 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 C5orf52A6NGY3 159 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 FOXE1O00358 373 aaPredicted RBP11.66□□□□□ -0.54
LITAF-221ENST00000622633 PTBP1P26599 531 aaKnown RBP eCLIP11.66□□□□□ -0.541e-6■■■■□ 22.8
LITAF-221ENST00000622633 STOMP27105 288 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 CD79BP40259 229 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 RORCP51449 518 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 VSX2P58304 361 aaPredicted RBP11.66□□□□□ -0.54
LITAF-221ENST00000622633 TNFRSF17Q02223 184 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 PDE7AQ13946 482 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 TEAD2Q15562 447 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 ZNF805Q5CZA5 627 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 CRB2Q5IJ48 1285 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 DPPA4Q7L190 304 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 KLBQ86Z14 1044 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 KDF1Q8NAX2 398 aaPredicted RBP11.66□□□□□ -0.54
LITAF-221ENST00000622633 TMEM145Q8NBT3 493 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 KREMEN2Q8NCW0 462 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 ATP6V1C2Q8NEY4 427 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 CNPPD1Q9BV87 410 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 GSDMCQ9BYG8 508 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 SPHK2Q9NRA0 654 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 WBP1LQ9NX94 342 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 POMT2Q9UKY4 750 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 ENPP4Q9Y6X5 453 aa11.66□□□□□ -0.54
LITAF-221ENST00000622633 D6RAR5 112 aa11.65□□□□□ -0.54
LITAF-221ENST00000622633 G3V3Q6 166 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms