RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 RNF113BQ8IZP6 322 aaKnown RBP7.43□□□□□ -1.22
VPS11-209ENST00000622309 SPICQ8N5J4 248 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 OR4Q3Q8NH05 313 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 NDRG1Q92597 394 aaKnown RBP7.43□□□□□ -1.22
VPS11-209ENST00000622309 CHFRQ96EP1 664 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 ABHD1Q96SE0 405 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 MFSD1Q9H3U5 465 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 LRTM1Q9HBL6 345 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 POPDC3Q9HBV1 291 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 CA10Q9NS85 328 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 RASL12Q9NYN1 266 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 DHRS7Q9Y394 339 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 MCM3APO60318 1980 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 TRIP11Q15643 1979 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 RLFQ13129 1914 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 C2orf92A0A1B0GVN3 265 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 NEDD8-MDP1E9PL57 170 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 NPC1O15118 1278 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 UBXN7O94888 489 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 F12P00748 615 aaPredicted RBP7.43□□□□□ -1.22
VPS11-209ENST00000622309 HEXAP06865 529 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 HOXC4P09017 264 aaPredicted RBP7.43□□□□□ -1.22
VPS11-209ENST00000622309 TNFRSF1BP20333 461 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 ITGA3P26006 1051 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 RAB5CP51148 216 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 LAMTOR4Q0VGL1 99 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 SLC5A12Q1EHB4 618 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 DUOXA1Q1HG43 343 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 PKDCCQ504Y2 493 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 ZC3H14Q6PJT7 736 aaKnown RBP7.43□□□□□ -1.22
VPS11-209ENST00000622309 ZNF551Q7Z340 670 aaPredicted RBP7.43□□□□□ -1.22
VPS11-209ENST00000622309 LAS2Q8IYD9 372 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 TCEANCQ8N8B7 351 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 SELENOMQ8WWX9 145 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 ORAI1Q96D31 301 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 PANX1Q96RD7 426 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 C1QTNF3Q9BXJ4 246 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 SUV39H2Q9H5I1 410 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 MINDY3Q9H8M7 445 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 TREM1Q9NP99 234 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 TAS2R13Q9NYV9 303 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 RPH3ALQ9UNE2 315 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 WASF3Q9UPY6 502 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 RUVBL1Q9Y265 456 aaKnown RBP7.43□□□□□ -1.22
VPS11-209ENST00000622309 GPR55Q9Y2T6 319 aaPredicted RBP7.43□□□□□ -1.22
VPS11-209ENST00000622309 THP07101 528 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 ZNF44P15621 663 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 S100A2P29034 98 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 OR1E2P47887 323 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 HCCSP53701 268 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 MBTPS1Q14703 1052 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 ZNF805Q5CZA5 627 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 RNLSQ5VYX0 342 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 C11orf88Q6PI97 169 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 MPZL3Q6UWV2 235 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 BCDIN3DQ7Z5W3 292 aaKnown RBP7.43□□□□□ -1.22
VPS11-209ENST00000622309 OAFQ86UD1 273 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 OR52I1Q8NGK6 324 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 OR6K3Q8NGY3 331 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 C14orf79Q96F83 325 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 POLR1EQ9GZS1 481 aaKnown RBP7.43□□□□□ -1.22
VPS11-209ENST00000622309 FZD3Q9NPG1 666 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 NPDC1Q9NQX5 325 aaPredicted RBP7.43□□□□□ -1.22
VPS11-209ENST00000622309 ACSS1Q9NUB1 689 aaPredicted RBP7.43□□□□□ -1.22
VPS11-209ENST00000622309 ASF1BQ9NVP2 202 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 RBM22Q9NW64 420 aaKnown RBP eCLIP7.43□□□□□ -1.22
VPS11-209ENST00000622309 TBC1D29Q9UFV1 150 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 NEU3Q9UQ49 428 aa7.43□□□□□ -1.22
VPS11-209ENST00000622309 WDR81Q562E7 1941 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 A0A1W2PRB8 838 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 CD8B2A6NJW9 211 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 ARPC1BO15143 372 aaKnown RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 MSCO60682 206 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 RBBP9O75884 186 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 SAGP10523 405 aaPredicted RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 TXNP10599 105 aaKnown RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 CD8BP10966 210 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 IFNGR1P15260 489 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 NFYBP25208 207 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 RNF144AP50876 292 aaPredicted RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 WNT3AP56704 352 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 RPS14P62263 151 aaKnown RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 PITPNAQ00169 270 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 TAP2Q03519 686 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 CLINT1Q14677 625 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 TMEM255AQ5JRV8 349 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 SLC30A6Q6NXT4 461 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 FAM71CQ8NEG0 241 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 OR5T3Q8NGG3 340 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 GPR150Q8NGU9 434 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 WNT8BQ93098 351 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 OCSTAMPQ9BR26 566 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 SOX7Q9BT81 388 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 SMCO4Q9NRQ5 59 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 FTSJ1Q9UET6 329 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 SF3B6Q9Y3B4 125 aaKnown RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 CHD5Q8TDI0 1954 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 A0A087X0M5 115 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 A0A1B0GUH1 482 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 A0A1B0GX30 115 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms