RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 EFHD2Q96C19 240 aaPredicted RBP12.41□□□□□ -0.42
SIRPA-204ENST00000622179 C7orf34Q96L11 122 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 ZNF559Q9BR84 538 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 C8orf33Q9H7E9 229 aaPredicted RBP12.41□□□□□ -0.42
SIRPA-204ENST00000622179 ZNF639Q9UID6 485 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 SERTAD3Q9UJW9 196 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 ERVK-19Q9WJR5 959 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 NTNG1Q9Y2I2 539 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 CDH10Q9Y6N8 788 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 A0A1W2PRQ8 180 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 H0YC42 278 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 PDCD5O14737 125 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 CD2P06729 351 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 PGGHGQ32M88 737 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 C9orf50Q5SZB4 431 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 RPTNQ6XPR3 784 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 PRICKLE2Q7Z3G6 844 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 SDR9C7Q8NEX9 313 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 SMPDL3BQ92485 455 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 LAMP5Q9UJQ1 280 aa12.41□□□□□ -0.42
SIRPA-204ENST00000622179 GREM1O60565 184 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 FCMRO60667 390 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 S100A1P23297 94 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 CD97P48960 835 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 RHAGQ02094 409 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 TNFRSF17Q02223 184 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 MESP2Q0VG99 397 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 NDUFA5Q16718 116 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 TP53I3Q53FA7 332 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 STEAP3Q658P3 488 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 PAQR6Q6TCH4 344 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 MCATQ8IVS2 390 aaKnown RBP12.4□□□□□ -0.42
SIRPA-204ENST00000622179 GPALPP1Q8IXQ4 340 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 PRR22Q8IZ63 422 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 TMEM255BQ8WV15 326 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 NSMAFQ92636 917 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 FGF14Q92915 247 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 ZDHHC12Q96GR4 267 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 CCDC32Q9BV29 185 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 SOX1O00570 391 aaPredicted RBP12.4□□□□□ -0.42
SIRPA-204ENST00000622179 ACP2P11117 423 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 CTHP32929 405 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 OPRD1P41143 372 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 MAGEA2P43356 314 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 GPR143P51810 404 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 MAT1AQ00266 395 aaKnown RBP12.4□□□□□ -0.42
SIRPA-204ENST00000622179 MLLT11Q13015 90 aaPredicted RBP12.4□□□□□ -0.42
SIRPA-204ENST00000622179 DEFB133Q30KQ1 61 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 AGBL4Q5VU57 503 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 KLHL24Q6TFL4 600 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 ZNF582Q96NG8 517 aaPredicted RBP12.4□□□□□ -0.42
SIRPA-204ENST00000622179 PDCD10Q9BUL8 212 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 ABCG5Q9H222 651 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 GPN3Q9UHW5 284 aaPredicted RBP12.4□□□□□ -0.42
SIRPA-204ENST00000622179 ICKQ9UPZ9 632 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 UTRNP46939 3433 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 HTR1AP08908 422 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 GP1BBP13224 206 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 FAUP35544 74 aaKnown RBP12.4□□□□□ -0.42
SIRPA-204ENST00000622179 EIF1AXP47813 144 aaKnown RBP12.4□□□□□ -0.42
SIRPA-204ENST00000622179 ZFP36L2P47974 494 aaKnown RBP12.4□□□□□ -0.42
SIRPA-204ENST00000622179 DUSP6Q16828 381 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 TRMT12Q53H54 448 aaKnown RBP12.4□□□□□ -0.42
SIRPA-204ENST00000622179 KIAA1211LQ6NV74 962 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 CNIH2Q6PI25 160 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 AMER3Q8N944 861 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 AVL9Q8NBF6 648 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 OR5T3Q8NGG3 340 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 TANKQ92844 425 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 LINC00615Q96LM1 132 aaPredicted RBP12.4□□□□□ -0.42
SIRPA-204ENST00000622179 SLC52A3Q9NQ40 469 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 KLK4Q9Y5K2 254 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 IER3IP1Q9Y5U9 82 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 WDR90Q96KV7 1748 aa12.4□□□□□ -0.42
SIRPA-204ENST00000622179 RNF13O43567 381 aa12.4□□□□□ -0.43
SIRPA-204ENST00000622179 CSO75390 466 aaKnown RBP12.4□□□□□ -0.43
SIRPA-204ENST00000622179 RGS9O75916 674 aaPredicted RBP12.4□□□□□ -0.43
SIRPA-204ENST00000622179 CFIP05156 583 aa12.4□□□□□ -0.43
SIRPA-204ENST00000622179 MAP3K8P41279 467 aa12.4□□□□□ -0.43
SIRPA-204ENST00000622179 TNFRSF4P43489 277 aa12.4□□□□□ -0.43
SIRPA-204ENST00000622179 PPP2CBP62714 309 aa12.4□□□□□ -0.43
SIRPA-204ENST00000622179 PPP2CAP67775 309 aa12.4□□□□□ -0.43
SIRPA-204ENST00000622179 ARHGAP11AQ6P4F7 1023 aa12.4□□□□□ -0.43
SIRPA-204ENST00000622179 NCCRP1Q6ZVX7 275 aaPredicted RBP12.4□□□□□ -0.43
SIRPA-204ENST00000622179 NKAIN4Q8IVV8 208 aa12.4□□□□□ -0.43
SIRPA-204ENST00000622179 LAX1Q8IWV1 398 aa12.4□□□□□ -0.43
SIRPA-204ENST00000622179 OR13C2Q8NGS9 318 aa12.4□□□□□ -0.43
SIRPA-204ENST00000622179 GABARAPL3Q9BY60 117 aa12.4□□□□□ -0.43
SIRPA-204ENST00000622179 UCKL1Q9NWZ5 548 aa12.4□□□□□ -0.43
SIRPA-204ENST00000622179 ZNF226Q9NYT6 803 aa12.4□□□□□ -0.43
SIRPA-204ENST00000622179 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.4□□□□□ -0.43
SIRPA-204ENST00000622179 NCR1O76036 304 aa12.39□□□□□ -0.43
SIRPA-204ENST00000622179 YES1P07947 543 aa12.39□□□□□ -0.43
SIRPA-204ENST00000622179 AP3S2P59780 193 aa12.39□□□□□ -0.43
SIRPA-204ENST00000622179 SLX4IPQ5VYV7 408 aa12.39□□□□□ -0.43
SIRPA-204ENST00000622179 ACSM5Q6NUN0 579 aa12.39□□□□□ -0.43
SIRPA-204ENST00000622179 RFT1Q96AA3 541 aa12.39□□□□□ -0.43
SIRPA-204ENST00000622179 ZNF707Q96C28 371 aaPredicted RBP12.39□□□□□ -0.43
SIRPA-204ENST00000622179 NECTIN4Q96NY8 510 aa12.39□□□□□ -0.43
SIRPA-204ENST00000622179 GPER1Q99527 375 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms