RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 AP2M1Q96CW1 435 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 C12orf66Q96MD2 445 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 PRMT1Q99873 361 aaKnown RBP3.16□□□□□ -1.9
BRCA1-229ENST00000621897 C11orf70Q9BRQ4 267 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 SPZ1Q9BXG8 430 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 GON7Q9BXV9 100 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 NMNAT2Q9BZQ4 307 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 SLC26A1Q9H2B4 701 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 COG4Q9H9E3 785 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 NYAP2Q9P242 653 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 ARMCX1Q9P291 453 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 CHRNA9Q9UGM1 479 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 MGAT4AQ9UM21 535 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 PLA2G4CQ9UP65 541 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 SLC9A8Q9Y2E8 581 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 CPQQ9Y646 472 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 HEATR9A2RTY3 570 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 SRRM4A7MD48 611 aaKnown RBP3.15□□□□□ -1.91
BRCA1-229ENST00000621897 IQCF5A8MTL0 148 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 TRDMT1O14717 391 aaKnown RBP3.15□□□□□ -1.91
BRCA1-229ENST00000621897 HAT1O14929 419 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 POLR1CO15160 346 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-229ENST00000621897 ATP9AO75110 1047 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 DNAJB6O75190 326 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 VPS26AO75436 327 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 FRAT2O75474 233 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-229ENST00000621897 KBTBD11O94819 623 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 KLHL2O95198 593 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 FGF19O95750 216 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 LY6G6DO95868 133 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 MMP10P09238 476 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 ZCCHC18P0CG32 403 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 SLC2A3P11169 496 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 UMPSP11172 480 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF18P17022 549 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 CYP2B6P20813 491 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 ATP6V1C1P21283 382 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 HOXA6P31267 233 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 ALDH3B1P43353 468 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 CRYBB1P53674 252 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-229ENST00000621897 BASP1P80723 227 aaKnown RBP3.15□□□□□ -1.91
BRCA1-229ENST00000621897 CSTF1Q05048 431 aaKnown RBP3.15□□□□□ -1.91
BRCA1-229ENST00000621897 XRCC4Q13426 336 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 PDIA5Q14554 519 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 ANKRD55Q3KP44 614 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 RFTN2Q52LD8 501 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-229ENST00000621897 ARMCX4Q5H9R4 360 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 SPANXN2Q5MJ10 180 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 PLPP4Q5VZY2 271 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 CLEC6AQ6EIG7 209 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 GRAMD2AQ8IUY3 354 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 TBC1D10CQ8IV04 446 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 MISPQ8IVT2 679 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 NAXDQ8IW45 347 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 PYROXD2Q8N2H3 581 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF565Q8N9K5 539 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 SMYD1Q8NB12 490 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF397Q8NF99 534 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-229ENST00000621897 BPIFCQ8NFQ6 507 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 OR13C5Q8NGS8 318 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 OR6F1Q8NGZ6 308 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 GPR148Q8TDV2 347 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 PCNPQ8WW12 178 aaKnown RBP3.15□□□□□ -1.91
BRCA1-229ENST00000621897 BADQ92934 168 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 C16orf58Q96GQ5 468 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 CDKN2AIPNLQ96HQ2 116 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 SENP8Q96LD8 212 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 RPRD1AQ96P16 312 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-229ENST00000621897 PANX2Q96RD6 677 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 CHP1Q99653 195 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 COQ7Q99807 217 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 HSD17B14Q9BPX1 270 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 ALG12Q9BV10 488 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 MRPL13Q9BYD1 178 aaKnown RBP3.15□□□□□ -1.91
BRCA1-229ENST00000621897 AUNIPQ9H7T9 357 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 NEK6Q9HC98 313 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 CUTCQ9NTM9 273 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 VPS54Q9P1Q0 977 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 CRLS1Q9UJA2 301 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 GPR132Q9UNW8 380 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 SLC6A5Q9Y345 797 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 FBXO7Q9Y3I1 522 aa3.15□□□□□ -1.91
BRCA1-229ENST00000621897 TRAV9-2A0A087WT02 112 aa3.14□□□□□ -1.91
BRCA1-229ENST00000621897 A0A0J9YYE9 177 aa3.14□□□□□ -1.91
BRCA1-229ENST00000621897 MBLAC1A4D2B0 266 aaPredicted RBP3.14□□□□□ -1.91
BRCA1-229ENST00000621897 BTBD17A6NE02 478 aa3.14□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF724A8MTY0 619 aa3.14□□□□□ -1.91
BRCA1-229ENST00000621897 MEI4A8MW99 385 aa3.14□□□□□ -1.91
BRCA1-229ENST00000621897 TCP11X1B4DZS4 312 aa3.14□□□□□ -1.91
BRCA1-229ENST00000621897 PSMD11O00231 422 aa3.14□□□□□ -1.91
BRCA1-229ENST00000621897 RRP8O43159 456 aaKnown RBP3.14□□□□□ -1.91
BRCA1-229ENST00000621897 AKR7A2O43488 359 aa3.14□□□□□ -1.91
BRCA1-229ENST00000621897 SULT1B1O43704 296 aa3.14□□□□□ -1.91
BRCA1-229ENST00000621897 SRPX2O60687 465 aaPredicted RBP3.14□□□□□ -1.91
BRCA1-229ENST00000621897 STBD1O95210 358 aa3.14□□□□□ -1.91
BRCA1-229ENST00000621897 OR6A2O95222 327 aa3.14□□□□□ -1.91
BRCA1-229ENST00000621897 TGM6O95932 706 aa3.14□□□□□ -1.91
BRCA1-229ENST00000621897 MBD3O95983 291 aa3.14□□□□□ -1.91
BRCA1-229ENST00000621897 NDUFB10O96000 172 aa3.14□□□□□ -1.91
BRCA1-229ENST00000621897 TRBC1P01850 177 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms